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#ifndef _EXCLUDE_
#define _EXCLUDE_
#include <admutils.h>
#include <mcio.h>
#include <stdio.h>
/* file name parameter : xregionname */
/* HW filter parameter : nhwfilter (-1 means no-filter) */
/* maximum number of regions : 1000
closed intervals in physical position include endpoints */
/* read file and set ignore flag for SNPs */
void excluderegions (char *xregionname, SNP ** snps, int nsnps,
char *deletesnpoutname);
void hwfilter (SNP ** snps, int nsnps, int nindiv, double nhwfilter,
char *deletesnpoutname);
#endif
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