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/*=========================================================================
*
* Copyright UMC Utrecht and contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0.txt
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*
*=========================================================================*/
#ifndef itkGPUResampleImageFilter_h
#define itkGPUResampleImageFilter_h
#include "itkResampleImageFilter.h"
#include "itkGPUImageToImageFilter.h"
#include "itkGPUInterpolateImageFunction.h"
#include "itkGPUBSplineInterpolateImageFunction.h"
#include "itkGPUBSplineBaseTransform.h"
#include "itkGPUTransformBase.h"
#include "itkGPUCompositeTransformBase.h"
namespace itk
{
/** Create a helper GPU Kernel class for GPUResampleImageFilter */
itkGPUKernelClassMacro(GPUResampleImageFilterKernel);
/** \class GPUResampleImageFilter
* \brief GPU version of ResampleImageFilter.
*
* \author Denis P. Shamonin and Marius Staring. Division of Image Processing,
* Department of Radiology, Leiden, The Netherlands
*
* \note This work was funded by the Netherlands Organisation for
* Scientific Research (NWO NRG-2010.02 and NWO 639.021.124).
*
* \ingroup GPUCommon
*/
template <typename TInputImage,
typename TOutputImage,
typename TInterpolatorPrecisionType = float,
typename TTransformPrecisionType = TInterpolatorPrecisionType>
class ITK_EXPORT GPUResampleImageFilter
: public GPUImageToImageFilter<
TInputImage,
TOutputImage,
ResampleImageFilter<TInputImage, TOutputImage, TInterpolatorPrecisionType, TTransformPrecisionType>>
{
public:
ITK_DISALLOW_COPY_AND_MOVE(GPUResampleImageFilter);
/** Standard class typedefs. */
using Self = GPUResampleImageFilter;
using CPUSuperclass =
ResampleImageFilter<TInputImage, TOutputImage, TInterpolatorPrecisionType, TTransformPrecisionType>;
using GPUSuperclass = GPUImageToImageFilter<TInputImage, TOutputImage, CPUSuperclass>;
using Pointer = SmartPointer<Self>;
using ConstPointer = SmartPointer<const Self>;
/** Method for creation through the object factory. */
itkNewMacro(Self);
/** Run-time type information (and related methods). */
itkTypeMacro(GPUResampleImageFilter, GPUSuperclass);
/** ImageDimension constants */
itkStaticConstMacro(InputImageDimension, unsigned int, TInputImage::ImageDimension);
itkStaticConstMacro(OutputImageDimension, unsigned int, TOutputImage::ImageDimension);
/** Some convenient typedefs. */
using InputImageType = TInputImage;
using OutputImageType = TOutputImage;
using GPUInputImage = typename GPUTraits<TInputImage>::Type;
using GPUOutputImage = typename GPUTraits<TOutputImage>::Type;
using InterpolatorPrecisionType = TInterpolatorPrecisionType;
/** Superclass typedefs. */
using InterpolatorType = typename CPUSuperclass::InterpolatorType;
using TransformType = typename CPUSuperclass::TransformType;
using ExtrapolatorType = typename CPUSuperclass::ExtrapolatorType;
using InputImageRegionType = typename CPUSuperclass::InputImageRegionType;
using OutputImageRegionType = typename CPUSuperclass::OutputImageRegionType;
using SizeType = typename CPUSuperclass::SizeType;
using IndexType = typename CPUSuperclass::IndexType;
using OutputImagePixelType = typename GPUSuperclass::OutputImagePixelType;
/** Other typedefs. */
using GPUKernelManagerPointer = typename OpenCLKernelManager::Pointer;
using GPUDataManagerPointer = typename GPUDataManager::Pointer;
using CompositeTransformBaseType = GPUCompositeTransformBase<InterpolatorPrecisionType, InputImageDimension>;
/** Typedefs for the B-spline interpolator. */
using GPUBSplineInterpolatorType = GPUBSplineInterpolateImageFunction<InputImageType, InterpolatorPrecisionType>;
using GPUBSplineInterpolatorCoefficientImageType = typename GPUBSplineInterpolatorType::GPUCoefficientImageType;
using GPUBSplineInterpolatorCoefficientImagePointer = typename GPUBSplineInterpolatorType::GPUCoefficientImagePointer;
using GPUBSplineInterpolatorDataManagerPointer = typename GPUBSplineInterpolatorType::GPUDataManagerPointer;
/** Typedefs for the B-spline transform. */
using GPUBSplineBaseTransformType = GPUBSplineBaseTransform<InterpolatorPrecisionType, InputImageDimension>;
/** Set the interpolator. */
void
SetInterpolator(InterpolatorType * _arg) override;
/** Set the extrapolator. Not yet supported. */
void
SetExtrapolator(ExtrapolatorType * _arg) override;
/** Set the transform. */
void
SetTransform(const TransformType * _arg) override;
/** Set/Get the requested number of splits on OpenCL device.
* Only works for 3D images. For 1D, 2D are always equal 1. */
itkSetMacro(RequestedNumberOfSplits, unsigned int);
itkGetConstMacro(RequestedNumberOfSplits, unsigned int);
protected:
GPUResampleImageFilter();
~GPUResampleImageFilter() override = default;
void
PrintSelf(std::ostream & os, Indent indent) const override;
void
GPUGenerateData() override;
// Supported GPU transform types
enum GPUTransformTypeEnum
{
IdentityTransform = 1,
MatrixOffsetTransform,
TranslationTransform,
BSplineTransform,
Else
};
/** Set arguments for the pre kernel manager. */
void
SetArgumentsForPreKernelManager(const typename GPUOutputImage::Pointer & output);
/** Set arguments for the loop kernel manager. */
void
SetArgumentsForLoopKernelManager(const typename GPUInputImage::Pointer & input,
const typename GPUOutputImage::Pointer & output);
/** Set arguments for the loop kernel manager. */
void
SetTransformParametersForLoopKernelManager(const std::size_t transformIndex);
/** Set arguments for the post kernel manager. */
void
SetArgumentsForPostKernelManager(const typename GPUInputImage::Pointer & input,
const typename GPUOutputImage::Pointer & output);
/** Set the B-spline transform coefficient images to the GPU. */
void
SetBSplineTransformCoefficientsToGPU(const std::size_t transformIndex);
/** Get transform type. */
const GPUTransformTypeEnum
GetTransformType(const int & transformIndex) const;
/** Check if a certain transform is present in the list of transforms. */
bool
HasTransform(const GPUTransformTypeEnum type) const;
/** Get a handle to a certain transform type. */
int
GetTransformHandle(const GPUTransformTypeEnum type) const;
/** Get a handle to the kernel given a handle to a transform. */
bool
GetKernelIdFromTransformId(const std::size_t & index, std::size_t & kernelId) const;
/** Get the BSpline base transform. */
GPUBSplineBaseTransformType *
GetGPUBSplineBaseTransform(const std::size_t transformIndex);
private:
GPUInterpolatorBase * m_InterpolatorBase{};
GPUTransformBase * m_TransformBase{};
GPUDataManagerPointer m_InputGPUImageBase{};
GPUDataManagerPointer m_OutputGPUImageBase{};
GPUDataManagerPointer m_FilterParameters{};
GPUDataManagerPointer m_DeformationFieldBuffer{};
unsigned int m_RequestedNumberOfSplits{};
using TransformHandle = std::pair<int, bool>;
using TransformsHandle = std::map<GPUTransformTypeEnum, TransformHandle>;
#if 0
class TransformKernelHelper
{
GPUTransformTypeEnum m_TransformType;
std::string m_TransformTypeAsString;
std::: size_t m_TransformKernelHandle;
bool m_Compiled;
TransformKernelHelper()
{
m_TransformType = GPUResampleImageFilter::Else;
m_TransformTypeAsString = "Else";
m_TransformKernelHandle = 0; // ??
m_Compiled = false;
}
};
std::vector< TransformKernelHelper > m_SupportedTransformKernels{};
#endif
std::vector<std::string> m_Sources{};
std::size_t m_SourceIndex{};
std::size_t m_InterpolatorSourceLoadedIndex{};
std::size_t m_TransformSourceLoadedIndex{};
bool m_InterpolatorIsBSpline{};
bool m_TransformIsCombo{};
std::size_t m_FilterPreGPUKernelHandle{};
TransformsHandle m_FilterLoopGPUKernelHandle{};
std::size_t m_FilterPostGPUKernelHandle{};
// GPU kernel managers
GPUKernelManagerPointer m_PreKernelManager{};
GPUKernelManagerPointer m_LoopKernelManager{};
GPUKernelManagerPointer m_PostKernelManager{};
};
} // end namespace itk
#ifndef ITK_MANUAL_INSTANTIATION
# include "itkGPUResampleImageFilter.hxx"
#endif
#endif /* itkGPUResampleImageFilter_h */
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