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/*=========================================================================
*
* Copyright UMC Utrecht and contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0.txt
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*
*=========================================================================*/
#ifndef elxOpenCLMovingGenericPyramid_hxx
#define elxOpenCLMovingGenericPyramid_hxx
#include "elxOpenCLSupportedImageTypes.h"
#include "elxOpenCLMovingGenericPyramid.h"
// GPU includes
#include "itkGPUImageFactory.h"
#include "itkOpenCLLogger.h"
// GPU factory includes
#include "itkGPURecursiveGaussianImageFilterFactory.h"
#include "itkGPUCastImageFilterFactory.h"
#include "itkGPUShrinkImageFilterFactory.h"
#include "itkGPUResampleImageFilterFactory.h"
#include "itkGPUIdentityTransformFactory.h"
#include "itkGPULinearInterpolateImageFunctionFactory.h"
namespace elastix
{
/**
* ******************* Constructor ***********************
*/
template <class TElastix>
OpenCLMovingGenericPyramid<TElastix>::OpenCLMovingGenericPyramid()
: m_GPUPyramidReady(true)
, m_GPUPyramidCreated(true)
, m_ContextCreated(false)
, m_UseOpenCL(true)
{
// Based on the Insight Journal paper:
// http://insight-journal.org/browse/publication/884
// it is not beneficial to create pyramids for 2D images with OpenCL.
// There are also small extra overhead and potential problems may appear.
// To avoid it, we simply run it on CPU for 2D images.
if constexpr (ImageDimension <= 2)
{
log::warn(
std::ostringstream{} << "WARNING: Creating the moving pyramid with OpenCL for 2D images is not beneficial.\n"
<< " The OpenCLMovingGenericPyramid is switching back to CPU mode.");
return;
}
// Check if the OpenCL context has been created.
itk::OpenCLContext::Pointer context = itk::OpenCLContext::GetInstance();
this->m_ContextCreated = context->IsCreated();
if (this->m_ContextCreated)
{
try
{
this->m_GPUPyramid = GPUPyramidType::New();
}
catch (itk::ExceptionObject & e)
{
log::error(std::ostringstream{} << "ERROR: Exception during GPU moving generic pyramid creation: " << e);
this->SwitchingToCPUAndReport(true);
this->m_GPUPyramidCreated = false;
}
}
else
{
this->SwitchingToCPUAndReport(false);
}
} // end Constructor
/**
* ******************* BeforeGenerateData ***********************
*/
template <class TElastix>
void
OpenCLMovingGenericPyramid<TElastix>::BeforeGenerateData()
{
// Local GPU input image
GPUInputImagePointer gpuInputImage;
if (this->m_GPUPyramidReady)
{
// Create GPU input image
try
{
gpuInputImage = GPUInputImageType::New();
gpuInputImage->GraftITKImage(this->GetInput());
gpuInputImage->AllocateGPU();
gpuInputImage->GetGPUDataManager()->SetCPUBufferLock(true);
gpuInputImage->GetGPUDataManager()->SetGPUDirtyFlag(true);
gpuInputImage->GetGPUDataManager()->UpdateGPUBuffer();
}
catch (itk::ExceptionObject & e)
{
log::error(std::ostringstream{} << "ERROR: Exception during creating GPU input image for moving generic pyramid: "
<< e);
this->SwitchingToCPUAndReport(true);
}
}
if (this->m_GPUPyramidReady)
{
// Set the m_GPUResampler properties the same way as Superclass1
this->m_GPUPyramid->SetNumberOfLevels(this->GetNumberOfLevels());
this->m_GPUPyramid->SetRescaleSchedule(this->GetRescaleSchedule());
this->m_GPUPyramid->SetSmoothingSchedule(this->GetSmoothingSchedule());
this->m_GPUPyramid->SetUseShrinkImageFilter(this->GetUseShrinkImageFilter());
this->m_GPUPyramid->SetComputeOnlyForCurrentLevel(this->GetComputeOnlyForCurrentLevel());
}
if (this->m_GPUPyramidReady)
{
try
{
this->m_GPUPyramid->SetInput(gpuInputImage);
}
catch (itk::ExceptionObject & e)
{
log::error(std::ostringstream{} << "ERROR: Exception during setting GPU moving generic pyramid: " << e);
this->SwitchingToCPUAndReport(true);
}
}
} // end BeforeGenerateData()
/**
* ******************* GenerateData ***********************
*/
template <class TElastix>
void
OpenCLMovingGenericPyramid<TElastix>::GenerateData()
{
if (!this->m_ContextCreated || !this->m_GPUPyramidCreated || !this->m_UseOpenCL || !this->m_GPUPyramidReady)
{
// Switch to CPU version
Superclass1::GenerateData();
return;
}
// First execute BeforeGenerateData to configure GPU pyramid
this->BeforeGenerateData();
if (!this->m_GPUPyramidReady)
{
Superclass1::GenerateData();
return;
}
bool computedUsingOpenCL = true;
// Register factories
this->RegisterFactories();
try
{
// Perform GPU pyramid execution
this->m_GPUPyramid->Update();
}
catch (itk::OpenCLCompileError & e)
{
// First log then report OpenCL compile error
itk::OpenCLLogger::Pointer logger = itk::OpenCLLogger::GetInstance();
logger->Write(itk::LoggerBase::PriorityLevelEnum::CRITICAL, e.GetDescription());
log::error(std::ostringstream{}
<< "ERROR: OpenCL program has not been compiled during updating GPU moving pyramid calculation.\n"
<< " Please check the '" << logger->GetLogFileName() << "' in output directory.");
computedUsingOpenCL = false;
}
catch (itk::ExceptionObject & e)
{
log::error(std::ostringstream{} << "ERROR: Exception during updating GPU moving pyramid calculation: " << e);
computedUsingOpenCL = false;
}
catch (...)
{
log::error("ERROR: Unknown exception during updating GPU moving pyramid calculation.");
computedUsingOpenCL = false;
}
// Unregister factories
this->UnregisterFactories();
if (computedUsingOpenCL)
{
// Graft outputs
const auto numberOfLevels = this->GetNumberOfLevels();
for (unsigned int i = 0; i < numberOfLevels; i++)
{
this->GraftNthOutput(i, this->m_GPUPyramid->GetOutput(i));
}
// Report OpenCL device to the log
this->ReportToLog();
}
else
{
log::warn(std::ostringstream{} << "WARNING: The moving pyramid computation with OpenCL failed due to the error.\n"
<< " The OpenCLMovingGenericPyramid is switching back to CPU mode.");
Superclass1::GenerateData();
}
} // end GenerateData()
/**
* ******************* RegisterFactories ***********************
*/
template <class TElastix>
void
OpenCLMovingGenericPyramid<TElastix>::RegisterFactories()
{
// Typedefs for factories
using ImageFactoryType = itk::GPUImageFactory2<OpenCLImageTypes, OpenCLImageDimentions>;
using RecursiveGaussianFactoryType =
itk::GPURecursiveGaussianImageFilterFactory2<OpenCLImageTypes, OpenCLImageTypes, OpenCLImageDimentions>;
using CastFactoryType = itk::GPUCastImageFilterFactory2<OpenCLImageTypes, OpenCLImageTypes, OpenCLImageDimentions>;
using ShrinkFactoryType =
itk::GPUShrinkImageFilterFactory2<OpenCLImageTypes, OpenCLImageTypes, OpenCLImageDimentions>;
using ResampleFactoryType =
itk::GPUResampleImageFilterFactory2<OpenCLImageTypes, OpenCLImageTypes, OpenCLImageDimentions>;
using IdentityFactoryType = itk::GPUIdentityTransformFactory2<OpenCLImageDimentions>;
using LinearFactoryType = itk::GPULinearInterpolateImageFunctionFactory2<OpenCLImageTypes, OpenCLImageDimentions>;
// Create factories
auto imageFactory = ImageFactoryType::New();
auto recursiveFactory = RecursiveGaussianFactoryType::New();
auto castFactory = CastFactoryType::New();
auto shrinkFactory = ShrinkFactoryType::New();
auto resampleFactory = ResampleFactoryType::New();
auto identityFactory = IdentityFactoryType::New();
auto linearFactory = LinearFactoryType::New();
// Register factories
itk::ObjectFactoryBase::RegisterFactory(imageFactory);
itk::ObjectFactoryBase::RegisterFactory(recursiveFactory);
itk::ObjectFactoryBase::RegisterFactory(castFactory);
itk::ObjectFactoryBase::RegisterFactory(shrinkFactory);
itk::ObjectFactoryBase::RegisterFactory(resampleFactory);
itk::ObjectFactoryBase::RegisterFactory(identityFactory);
itk::ObjectFactoryBase::RegisterFactory(linearFactory);
// Append them
this->m_Factories.push_back(imageFactory.GetPointer());
this->m_Factories.push_back(recursiveFactory.GetPointer());
this->m_Factories.push_back(castFactory.GetPointer());
this->m_Factories.push_back(shrinkFactory.GetPointer());
this->m_Factories.push_back(resampleFactory.GetPointer());
this->m_Factories.push_back(identityFactory.GetPointer());
this->m_Factories.push_back(linearFactory.GetPointer());
} // end RegisterFactories()
/**
* ******************* UnregisterFactories ***********************
*/
template <class TElastix>
void
OpenCLMovingGenericPyramid<TElastix>::UnregisterFactories()
{
for (std::vector<ObjectFactoryBasePointer>::iterator it = this->m_Factories.begin(); it != this->m_Factories.end();
++it)
{
itk::ObjectFactoryBase::UnRegisterFactory(*it);
}
this->m_Factories.clear();
} // end UnregisterFactories()
/**
* ******************* BeforeRegistration ***********************
*/
template <class TElastix>
void
OpenCLMovingGenericPyramid<TElastix>::BeforeRegistration()
{
// Are we using a OpenCL enabled GPU for pyramid?
this->m_UseOpenCL = true;
this->m_Configuration->ReadParameter(this->m_UseOpenCL, "OpenCLMovingGenericImagePyramidUseOpenCL", 0);
} // end BeforeRegistration()
/**
* ******************* ReadFromFile ****************************
*/
template <class TElastix>
void
OpenCLMovingGenericPyramid<TElastix>::ReadFromFile()
{
// OpenCL pyramid specific.
this->m_UseOpenCL = true;
this->m_Configuration->ReadParameter(this->m_UseOpenCL, "OpenCLMovingGenericImagePyramidUseOpenCL", 0);
} // end ReadFromFile()
/**
* ************************* SwitchingToCPUAndReport ************************
*/
template <class TElastix>
void
OpenCLMovingGenericPyramid<TElastix>::SwitchingToCPUAndReport(const bool configError)
{
if (!configError)
{
log::warn(std::ostringstream{} << "WARNING: The OpenCL context could not be created.\n"
<< " The OpenCLMovingGenericImagePyramid is switching back to CPU mode.");
}
else
{
log::warn(std::ostringstream{} << "WARNING: Unable to configure the GPU.\n"
<< " The OpenCLMovingGenericImagePyramid is switching back to CPU mode.");
}
this->m_GPUPyramidReady = false;
} // end SwitchingToCPUAndReport()
/**
* ************************* ReportToLog ************************************
*/
template <class TElastix>
void
OpenCLMovingGenericPyramid<TElastix>::ReportToLog()
{
itk::OpenCLContext::Pointer context = itk::OpenCLContext::GetInstance();
itk::OpenCLDevice device = context->GetDefaultDevice();
log::info(std::ostringstream{} << " Moving pyramid was computed by " << device.GetName() << " from "
<< device.GetVendor() << ".");
} // end ReportToLog()
} // end namespace elastix
#endif // end #ifndef elxOpenCLMovingGenericPyramid_hxx
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