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/*=========================================================================
*
* Copyright UMC Utrecht and contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0.txt
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*
*=========================================================================*/
#include "itkFullSearchOptimizer.h"
#include "itkCommand.h"
#include "itkEventObject.h"
#include "itkMacro.h"
#include "itkNumericTraits.h"
namespace itk
{
/**
* ************************ Constructor **************************
*/
FullSearchOptimizer::FullSearchOptimizer()
{
itkDebugMacro("Constructor");
} // end constructor
/**
* ***************** Start the optimization **********************
*/
void
FullSearchOptimizer::StartOptimization()
{
itkDebugMacro("StartOptimization");
m_CurrentIteration = 0;
this->ProcessSearchSpaceChanges();
m_CurrentIndexInSearchSpace.Fill(0);
m_BestIndexInSearchSpace.Fill(0);
m_CurrentPointInSearchSpace = this->IndexToPoint(m_CurrentIndexInSearchSpace);
m_BestPointInSearchSpace = m_CurrentPointInSearchSpace;
this->SetCurrentPosition(this->PointToPosition(m_CurrentPointInSearchSpace));
if (m_Maximize)
{
m_BestValue = NumericTraits<double>::NonpositiveMin();
}
else
{
m_BestValue = NumericTraits<double>::max();
}
this->ResumeOptimization();
}
/**
* ******************** Resume the optimization ******************
*/
void
FullSearchOptimizer::ResumeOptimization()
{
itkDebugMacro("ResumeOptimization");
m_Stop = false;
InvokeEvent(StartEvent());
while (!m_Stop)
{
try
{
m_Value = m_CostFunction->GetValue(this->GetCurrentPosition());
}
catch (const ExceptionObject &)
{
// An exception has occurred.
// Terminate immediately.
m_StopCondition = MetricError;
StopOptimization();
// Pass exception to caller
throw;
}
if (m_Stop)
{
break;
}
/** Check if the value is a minimum or maximum */
if ((m_Value < m_BestValue) ^ m_Maximize) // ^ = xor, yields true if only one of the expressions is true
{
m_BestValue = m_Value;
m_BestPointInSearchSpace = m_CurrentPointInSearchSpace;
m_BestIndexInSearchSpace = m_CurrentIndexInSearchSpace;
}
this->InvokeEvent(IterationEvent());
/** Prepare for next step */
++m_CurrentIteration;
if (m_CurrentIteration >= this->GetNumberOfIterations())
{
m_StopCondition = FullRangeSearched;
StopOptimization();
break;
}
/** Set the next position in search space. */
this->UpdateCurrentPosition();
} // end while
} // end function ResumeOptimization
/**
* ************************** Stop optimization ******************
*/
void
FullSearchOptimizer::StopOptimization()
{
itkDebugMacro("StopOptimization");
m_Stop = true;
this->SetCurrentPosition(this->PointToPosition(m_BestPointInSearchSpace));
InvokeEvent(EndEvent());
} // end function StopOptimization
/**
* ********************* UpdateCurrentPosition *******************
*
* Goes to the next point in search space
*
* example of sequence of indices in a 3d search space:
*
* dim1: 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2
* dim2: 0 0 0 1 1 1 2 2 2 0 0 0 1 1 1 2 2 2 0 0 0 1 1 1 2 2 2
* dim3: 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 1 1 1 2 2 2 2 2 2 2 2 2
*
* The indices are transformed to points in search space with the formula:
* point[i] = min[i] + stepsize[i]*index[i] for all i.
*
* Then the appropriate parameters in the ParameterArray are updated.
*/
void
FullSearchOptimizer::UpdateCurrentPosition()
{
itkDebugMacro("Current position updated.");
/** Get the current parameters; const_cast, because we want to adapt it later. */
ParametersType & currentPosition = const_cast<ParametersType &>(this->GetCurrentPosition());
/** Get the dimension and sizes of the searchspace. */
const unsigned int searchSpaceDimension = this->GetNumberOfSearchSpaceDimensions();
const SearchSpaceSizeType & searchSpaceSize = this->GetSearchSpaceSize();
/** Derive the index of the next search space point */
bool JustSetPreviousDimToZero = true;
for (unsigned int ssdim = 0; ssdim < searchSpaceDimension; ++ssdim) // loop over all dimensions of the search space
{
/** if the full range of ssdim-1 has been searched (so, if its
* index has just been set back to 0) then increase index[ssdim] */
if (JustSetPreviousDimToZero)
{
/** reset the bool */
JustSetPreviousDimToZero = false;
/** determine the new value of m_CurrentIndexInSearchSpace[ssdim] */
unsigned int dummy = m_CurrentIndexInSearchSpace[ssdim] + 1;
if (dummy == searchSpaceSize[ssdim])
{
m_CurrentIndexInSearchSpace[ssdim] = 0;
JustSetPreviousDimToZero = true;
}
else
{
m_CurrentIndexInSearchSpace[ssdim] = dummy;
}
} // end if justsetprevdimtozero
} // end for
/** Initialise the iterator. */
SearchSpaceIteratorType it(m_SearchSpace->Begin());
/** Transform the index to a point in search space.
* Change the appropriate parameters in the ParameterArray.
*
* The IndexToPoint and PointToParameter functions are not used here,
* because we edit directly in the currentPosition (faster).
*/
for (unsigned int ssdim = 0; ssdim < searchSpaceDimension; ++ssdim)
{
/** Transform the index to a point; point = min + step*index */
RangeType range = it.Value();
m_CurrentPointInSearchSpace[ssdim] = range[0] + static_cast<double>(range[2] * m_CurrentIndexInSearchSpace[ssdim]);
/** Update the array of parameters. */
currentPosition[it.Index()] = m_CurrentPointInSearchSpace[ssdim];
++it;
} // end for
} // end UpdateCurrentPosition
/**
* ********************* ProcessSearchSpaceChanges **************
*/
void
FullSearchOptimizer::ProcessSearchSpaceChanges()
{
if (m_SearchSpace->GetMTime() > m_LastSearchSpaceChanges)
{
/** Update the number of search space dimensions. */
m_NumberOfSearchSpaceDimensions = static_cast<unsigned int>(m_SearchSpace->Size());
/** Set size of arrays accordingly */
m_SearchSpaceSize.SetSize(m_NumberOfSearchSpaceDimensions);
m_CurrentIndexInSearchSpace.SetSize(m_NumberOfSearchSpaceDimensions);
m_CurrentPointInSearchSpace.SetSize(m_NumberOfSearchSpaceDimensions);
m_BestIndexInSearchSpace.SetSize(m_NumberOfSearchSpaceDimensions);
m_BestPointInSearchSpace.SetSize(m_NumberOfSearchSpaceDimensions);
/** Initialise an iterator over the search space map. */
SearchSpaceIteratorType it(m_SearchSpace->Begin());
for (unsigned int ssdim = 0; ssdim < m_NumberOfSearchSpaceDimensions; ++ssdim)
{
RangeType range = it.Value();
m_SearchSpaceSize[ssdim] = static_cast<unsigned long>((range[1] - range[0]) / range[2]) + 1;
++it;
}
} // end if search space modified
/** Remember the time of the last processed changes */
m_LastSearchSpaceChanges = m_SearchSpace->GetMTime();
} // end function ProcessSearchSpaceChanges
/**
* ********************** AddSearchDimension ********************
*
* Add a dimension to the SearchSpace
*/
void
FullSearchOptimizer::AddSearchDimension(unsigned int param_nr,
RangeValueType minimum,
RangeValueType maximum,
RangeValueType step)
{
if (!m_SearchSpace)
{
m_SearchSpace = SearchSpaceType::New();
}
/** Fill a range array */
RangeType range;
range[0] = minimum;
range[1] = maximum;
range[2] = step;
/** Delete the range if it already was defined before */
m_SearchSpace->DeleteIndex(param_nr);
/** Insert the new range specification */
m_SearchSpace->InsertElement(param_nr, range);
}
/**
* ******************* RemoveSearchDimension ********************
*
* Remove a dimension from the SearchSpace
*/
void
FullSearchOptimizer::RemoveSearchDimension(unsigned int param_nr)
{
if (m_SearchSpace)
{
m_SearchSpace->DeleteIndex(param_nr);
}
}
/**
* ***************** GetNumberOfIterations **********************
*
* Get the total number of iterations = sizes[0]*sizes[1]*sizes[2]* etc.....
*/
unsigned long
FullSearchOptimizer::GetNumberOfIterations()
{
SearchSpaceSizeType sssize = this->GetSearchSpaceSize();
unsigned int maxssdim = this->GetNumberOfSearchSpaceDimensions();
unsigned long nr_it = 0;
if (maxssdim > 0)
{
nr_it = sssize[0];
for (unsigned int ssdim = 1; ssdim < maxssdim; ++ssdim)
{
nr_it *= sssize[ssdim];
}
} // end if
return nr_it;
}
/**
* ******************** GetNumberOfSearchSpaceDimensions ********
*
* Get the Dimension of the SearchSpace.
*/
unsigned int
FullSearchOptimizer::GetNumberOfSearchSpaceDimensions()
{
this->ProcessSearchSpaceChanges();
return this->m_NumberOfSearchSpaceDimensions;
}
/**
* ******************** GetSearchSpaceSize **********************
*
* Returns an array containing trunc((max-min)/step) for each
* SearchSpaceDimension)
*/
const FullSearchOptimizer::SearchSpaceSizeType &
FullSearchOptimizer::GetSearchSpaceSize()
{
this->ProcessSearchSpaceChanges();
return this->m_SearchSpaceSize;
}
/**
* ********************* PointToPosition ************************
*/
FullSearchOptimizer::ParametersType
FullSearchOptimizer::PointToPosition(const SearchSpacePointType & point)
{
const unsigned int searchSpaceDimension = this->GetNumberOfSearchSpaceDimensions();
/** \todo check if point has the same dimension. */
ParametersType param = this->GetInitialPosition();
/** Initialise the iterator. */
SearchSpaceIteratorType it(m_SearchSpace->Begin());
/** Transform the index to a point in search space. */
for (unsigned int ssdim = 0; ssdim < searchSpaceDimension; ++ssdim)
{
/** Update the array of parameters. */
param[it.Index()] = point[ssdim];
/** go to next dimension in search space */
++it;
}
return param;
} // end point to position
/**
* ********************* IndexToPosition ************************
*/
FullSearchOptimizer::ParametersType
FullSearchOptimizer::IndexToPosition(const SearchSpaceIndexType & index)
{
return this->PointToPosition(this->IndexToPoint(index));
}
/**
* ********************* IndexToPoint ***************************
*/
FullSearchOptimizer::SearchSpacePointType
FullSearchOptimizer::IndexToPoint(const SearchSpaceIndexType & index)
{
const unsigned int searchSpaceDimension = this->GetNumberOfSearchSpaceDimensions();
SearchSpacePointType point(searchSpaceDimension);
/** Initialise the iterator. */
SearchSpaceIteratorType it(m_SearchSpace->Begin());
/** Transform the index to a point in search space. */
for (unsigned int ssdim = 0; ssdim < searchSpaceDimension; ++ssdim)
{
/** point = min + step*index */
RangeType range = it.Value();
point[ssdim] = range[0] + static_cast<double>(range[2] * index[ssdim]);
/** go to next dimension in search space */
++it;
} // end for
return point;
} // end IndexToPoint
} // end namespace itk
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