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/*=========================================================================
*
* Copyright UMC Utrecht and contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0.txt
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*
*=========================================================================*/
#ifndef itkAdvancedTransformAdapter_h
#define itkAdvancedTransformAdapter_h
#include "itkAdvancedTransform.h"
#include "itkMacro.h"
#include <itkDeref.h>
namespace elastix
{
/** \brief Adapts the ITK transform that is specified by AdvancedTransformAdapter::SetExternalTransform to the elastix
* AdvancedTransform interface.
*
* DO NOT USE IT FOR REGISTRATION. DO NOT USE IT TO RETRIEVE JACOBIAN OR THE HESSIAN VALUES.
*
* \ingroup Transforms
*/
template <class TScalarType, unsigned int NDimensions>
class ITK_TEMPLATE_EXPORT AdvancedTransformAdapter
: public itk::AdvancedTransform<TScalarType, NDimensions, NDimensions>
{
public:
ITK_DISALLOW_COPY_AND_MOVE(AdvancedTransformAdapter);
/** Standard class typedefs. */
using Self = AdvancedTransformAdapter;
using Superclass = itk::AdvancedTransform<TScalarType, NDimensions, NDimensions>;
using Pointer = itk::SmartPointer<Self>;
using ConstPointer = itk::SmartPointer<const Self>;
/** New macro for creation of through the object factory.*/
itkNewMacro(Self);
/** Run-time type information (and related methods). */
itkTypeMacro(AdvancedTransformAdapter, AdvancedTransform);
/** Dimension of the domain spaces. */
itkStaticConstMacro(InputSpaceDimension, unsigned int, Superclass::InputSpaceDimension);
itkStaticConstMacro(OutputSpaceDimension, unsigned int, Superclass::OutputSpaceDimension);
/** Superclass typedefs */
using typename Superclass::ParametersType;
using typename Superclass::JacobianType;
using typename Superclass::InputVectorType;
using typename Superclass::OutputVectorType;
using typename Superclass::InputCovariantVectorType;
using typename Superclass::OutputCovariantVectorType;
using typename Superclass::InputVnlVectorType;
using typename Superclass::OutputVnlVectorType;
using typename Superclass::InputPointType;
using typename Superclass::OutputPointType;
using typename Superclass::NonZeroJacobianIndicesType;
using typename Superclass::SpatialHessianType;
using typename Superclass::SpatialJacobianType;
using typename Superclass::JacobianOfSpatialHessianType;
using typename Superclass::JacobianOfSpatialJacobianType;
/** Set the transformation parameters. */
void
SetParameters(const ParametersType & parameters) override
{
// SetParameters may be called by elx::TransformBase<TElastix>::ReadFromFile(), but only for an empty list of
// parameters _and_ an unspecified (null) m_ExternalTransform.
if (m_ExternalTransform || !parameters.empty())
{
itkExceptionMacro("The parameters of an external transform cannot be set! Only the trivial case of setting an "
"empty parameters to an unspecified (null) external transform is supported!");
}
}
/** Set the fixed parameters. Not implemented for this transform. */
void
SetFixedParameters(const ParametersType &) override
{
itkExceptionMacro(<< unimplementedOverrideMessage);
}
/** Get the fixed parameters. */
const ParametersType &
GetFixedParameters() const override
{
return itk::Deref(m_ExternalTransform.GetPointer()).GetFixedParameters();
}
/** Transform a point. */
OutputPointType
TransformPoint(const InputPointType & point) const override
{
return itk::Deref(m_ExternalTransform.GetPointer()).TransformPoint(point);
}
/** These vector transforms are not implemented for this transform. */
OutputVectorType
TransformVector(const InputVectorType &) const override
{
itkExceptionMacro(<< unimplementedOverrideMessage);
}
OutputVnlVectorType
TransformVector(const InputVnlVectorType &) const override
{
itkExceptionMacro(<< unimplementedOverrideMessage);
}
OutputCovariantVectorType
TransformCovariantVector(const InputCovariantVectorType &) const override
{
itkExceptionMacro(<< unimplementedOverrideMessage);
}
bool
IsLinear() const override
{
return itk::Deref(m_ExternalTransform.GetPointer()).IsLinear();
}
/** Must be provided. */
void
GetJacobian(const InputPointType &, JacobianType &, NonZeroJacobianIndicesType &) const override
{
itkExceptionMacro(<< unimplementedOverrideMessage);
}
void
GetSpatialJacobian(const InputPointType &, SpatialJacobianType &) const override
{
itkExceptionMacro(<< unimplementedOverrideMessage);
}
void
GetSpatialHessian(const InputPointType &, SpatialHessianType &) const override
{
itkExceptionMacro(<< unimplementedOverrideMessage);
}
void
GetJacobianOfSpatialJacobian(const InputPointType &,
JacobianOfSpatialJacobianType &,
NonZeroJacobianIndicesType &) const override
{
itkExceptionMacro(<< unimplementedOverrideMessage);
}
void
GetJacobianOfSpatialJacobian(const InputPointType &,
SpatialJacobianType &,
JacobianOfSpatialJacobianType &,
NonZeroJacobianIndicesType &) const override
{
itkExceptionMacro(<< unimplementedOverrideMessage);
}
void
GetJacobianOfSpatialHessian(const InputPointType &,
JacobianOfSpatialHessianType &,
NonZeroJacobianIndicesType &) const override
{
itkExceptionMacro(<< unimplementedOverrideMessage);
}
void
GetJacobianOfSpatialHessian(const InputPointType &,
SpatialHessianType &,
JacobianOfSpatialHessianType &,
NonZeroJacobianIndicesType &) const override
{
itkExceptionMacro(<< unimplementedOverrideMessage);
}
using typename Superclass::TransformType;
itkSetObjectMacro(ExternalTransform, TransformType);
/** \note `GetModifiableExternalTransform()` is `const`, because it does not affect the adapter itself. */
TransformType *
GetModifiableExternalTransform() const
{
return m_ExternalTransform.GetPointer();
}
protected:
/** Default-constructor. */
AdvancedTransformAdapter() = default;
/** Destructor. */
~AdvancedTransformAdapter() override = default;
/** Print contents of an AdvancedTransformAdapter. */
void
PrintSelf(std::ostream & os, itk::Indent indent) const override
{
Superclass::PrintSelf(os, indent);
os << indent << "ExternalTransform: ";
if (m_ExternalTransform)
{
os << *m_ExternalTransform << std::endl;
}
else
{
os << indent << "null" << std::endl;
}
}
private:
// Private using-declarations, to avoid `-Woverloaded-virtual` warnings from GCC (GCC 11.4).
using Superclass::TransformCovariantVector;
using Superclass::TransformVector;
static constexpr const char * unimplementedOverrideMessage = "Not implemented for AdvancedTransformAdapter";
itk::SmartPointer<TransformType> m_ExternalTransform{};
};
} // namespace elastix
#endif /* itkAdvancedTransformAdapter_h */
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