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/*=========================================================================
*
* Copyright UMC Utrecht and contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0.txt
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*
*=========================================================================*/
#ifndef itkGPUShrinkImageFilter_hxx
#define itkGPUShrinkImageFilter_hxx
#include "itkGPUShrinkImageFilter.h"
#include "itkOpenCLUtil.h"
namespace itk
{
/**
* ****************** Constructor ***********************
*/
template <typename TInputImage, typename TOutputImage>
GPUShrinkImageFilter<TInputImage, TOutputImage>::GPUShrinkImageFilter()
{
std::ostringstream defines;
if (TInputImage::ImageDimension > 3 || TInputImage::ImageDimension < 1)
{
itkExceptionMacro("GPUShrinkImageFilter supports 1/2/3D image.");
}
defines << "#define DIM_" << int(TInputImage::ImageDimension) << "\n";
defines << "#define INPIXELTYPE ";
GetTypenameInString(typeid(typename TInputImage::PixelType), defines);
defines << "#define OUTPIXELTYPE ";
GetTypenameInString(typeid(typename TOutputImage::PixelType), defines);
// OpenCL kernel source
const char * GPUSource = GPUShrinkImageFilterKernel::GetOpenCLSource();
// Build and create kernel
OpenCLProgram program = this->m_GPUKernelManager->BuildProgramFromSourceCode(GPUSource, defines.str());
if (!program.IsNull())
{
this->m_FilterGPUKernelHandle = this->m_GPUKernelManager->CreateKernel(program, "ShrinkImageFilter");
}
else
{
itkExceptionMacro("Kernel has not been loaded from:\n" << GPUSource);
}
} // end Constructor()
/**
* ****************** GPUGenerateData ***********************
*/
template <typename TInputImage, typename TOutputImage>
void
GPUShrinkImageFilter<TInputImage, TOutputImage>::GPUGenerateData()
{
itkDebugMacro("Calling GPUShrinkImageFilter::GPUGenerateData()");
using GPUInputImage = typename GPUTraits<TInputImage>::Type;
using GPUOutputImage = typename GPUTraits<TOutputImage>::Type;
typename GPUInputImage::Pointer inPtr = dynamic_cast<GPUInputImage *>(this->ProcessObject::GetInput(0));
typename GPUOutputImage::Pointer otPtr = dynamic_cast<GPUOutputImage *>(this->ProcessObject::GetOutput(0));
// Perform the safe check
if (inPtr.IsNull())
{
itkExceptionMacro("The GPU InputImage is NULL. Filter unable to perform.");
}
if (otPtr.IsNull())
{
itkExceptionMacro("The GPU OutputImage is NULL. Filter unable to perform.");
}
// Convert the factor for convenient multiplication
typename TOutputImage::SizeType factorSize;
const ShrinkFactorsType shrinkFactors = this->GetShrinkFactors();
for (std::size_t i = 0; i < InputImageDimension; ++i)
{
factorSize[i] = shrinkFactors[i];
}
// Define a few indices that will be used to transform from an input pixel
// to an output pixel
OutputIndexType outputIndex;
OutputOffsetType offsetIndex;
typename TOutputImage::PointType tempPoint;
// Use this index to compute the offset everywhere in this class
outputIndex = otPtr->GetLargestPossibleRegion().GetIndex();
// We wish to perform the following mapping of outputIndex to
// inputIndex on all points in our region
otPtr->TransformIndexToPhysicalPoint(outputIndex, tempPoint);
const InputIndexType inputIndex = inPtr->TransformPhysicalPointToIndex(tempPoint);
// Given that the size is scaled by a constant factor eq:
// inputIndex = outputIndex * factorSize
// is equivalent up to a fixed offset which we now compute
OffsetValueType zeroOffset = 0;
for (std::size_t i = 0; i < InputImageDimension; ++i)
{
offsetIndex[i] = inputIndex[i] - outputIndex[i] * shrinkFactors[i];
// It is plausible that due to small amounts of loss of numerical
// precision that the offset is negative, this would cause sampling
// out of out region, this is insurance against that possibility
offsetIndex[i] = std::max(zeroOffset, offsetIndex[i]);
}
const typename GPUOutputImage::SizeType inSize = inPtr->GetLargestPossibleRegion().GetSize();
const typename GPUOutputImage::SizeType outSize = otPtr->GetLargestPossibleRegion().GetSize();
const OpenCLSize localSize = OpenCLSize::GetLocalWorkSize(this->m_GPUKernelManager->GetContext()->GetDefaultDevice());
typename GPUInputImage::SizeType globalSize;
for (std::size_t i = 0; i < InputImageDimension; ++i)
{
// total # of threads
globalSize[i] =
localSize[i] *
(static_cast<unsigned int>(std::ceil(static_cast<float>(outSize[i]) / static_cast<float>(localSize[i]))));
}
// arguments set up
int argidx = 0;
this->m_GPUKernelManager->SetKernelArgWithImage(this->m_FilterGPUKernelHandle, argidx++, inPtr->GetGPUDataManager());
this->m_GPUKernelManager->SetKernelArgWithImage(this->m_FilterGPUKernelHandle, argidx++, otPtr->GetGPUDataManager());
// set arguments for image size/offset/shrinkfactors
unsigned int inImageSize[InputImageDimension];
unsigned int outImageSize[InputImageDimension];
for (unsigned int i = 0; i < InputImageDimension; ++i)
{
inImageSize[i] = inSize[i];
outImageSize[i] = outSize[i];
}
unsigned int offset[InputImageDimension];
unsigned int shrinkfactors[InputImageDimension];
for (std::size_t i = 0; i < InputImageDimension; ++i)
{
offset[i] = offsetIndex[i];
shrinkfactors[i] = factorSize[i];
}
const auto ImageDim = InputImageDimension;
switch (ImageDim)
{
case 1:
this->m_GPUKernelManager->SetKernelArg(this->m_FilterGPUKernelHandle, argidx++, sizeof(cl_uint), &inImageSize);
this->m_GPUKernelManager->SetKernelArg(this->m_FilterGPUKernelHandle, argidx++, sizeof(cl_uint), &outImageSize);
this->m_GPUKernelManager->SetKernelArg(this->m_FilterGPUKernelHandle, argidx++, sizeof(cl_uint), &offset);
this->m_GPUKernelManager->SetKernelArg(this->m_FilterGPUKernelHandle, argidx++, sizeof(cl_uint), &shrinkfactors);
break;
case 2:
this->m_GPUKernelManager->SetKernelArg(this->m_FilterGPUKernelHandle, argidx++, sizeof(cl_uint2), &inImageSize);
this->m_GPUKernelManager->SetKernelArg(this->m_FilterGPUKernelHandle, argidx++, sizeof(cl_uint2), &outImageSize);
this->m_GPUKernelManager->SetKernelArg(this->m_FilterGPUKernelHandle, argidx++, sizeof(cl_uint2), &offset);
this->m_GPUKernelManager->SetKernelArg(this->m_FilterGPUKernelHandle, argidx++, sizeof(cl_uint2), &shrinkfactors);
break;
case 3:
this->m_GPUKernelManager->SetKernelArg(this->m_FilterGPUKernelHandle, argidx++, sizeof(cl_uint3), &inImageSize);
this->m_GPUKernelManager->SetKernelArg(this->m_FilterGPUKernelHandle, argidx++, sizeof(cl_uint3), &outImageSize);
this->m_GPUKernelManager->SetKernelArg(this->m_FilterGPUKernelHandle, argidx++, sizeof(cl_uint3), &offset);
this->m_GPUKernelManager->SetKernelArg(this->m_FilterGPUKernelHandle, argidx++, sizeof(cl_uint3), &shrinkfactors);
break;
}
// launch kernel
OpenCLEvent event =
this->m_GPUKernelManager->LaunchKernel(this->m_FilterGPUKernelHandle, OpenCLSize(globalSize), localSize);
event.WaitForFinished();
itkDebugMacro("GPUShrinkImageFilter::GPUGenerateData() finished");
} // end GPUGenerateData()
/**
* ****************** PrintSelf ***********************
*/
template <typename TInputImage, typename TOutputImage>
void
GPUShrinkImageFilter<TInputImage, TOutputImage>::PrintSelf(std::ostream & os, Indent indent) const
{
CPUSuperclass::PrintSelf(os, indent);
GPUSuperclass::PrintSelf(os, indent);
} // end PrintSelf()
} // end namespace itk
#endif /* itkGPUShrinkImageFilter_hxx */
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