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Source: embassy-domainatrix
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Charles Plessy <plessy@debian.org>,
Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper (>= 11~),
emboss-lib (>= 6.6.0-1~),
emboss-lib (<< 6.6.1~),
libx11-dev,
libgd-dev,
default-libmysqlclient-dev,
libpq-dev
Standards-Version: 4.2.1
Vcs-Browser: https://salsa.debian.org/med-team/embassy-domainatrix
Vcs-Git: https://salsa.debian.org/med-team/embassy-domainatrix.git
Homepage: http://emboss.sourceforge.net/apps/cvs/embassy/index.html#DOMAINATRIX
Package: embassy-domainatrix
Architecture: any
Depends: ${shlibs:Depends},
${misc:Depends},
emboss-lib (>= 6.6.0-1~),
emboss-lib (<< 6.6.1~)
Recommends: emboss
Suggests: embassy
Description: Extra EMBOSS commands to handle domain classification file
The DOMAINATRIX programs were developed by Jon Ison and colleagues at MRC HGMP
for their protein domain research. They are included as an EMBASSY package as
a work in progress.
.
Applications in the current domainatrix release are cathparse (generates DCF
file from raw CATH files), domainnr (removes redundant domains from a DCF
file), domainreso (removes low resolution domains from a DCF file), domainseqs
(adds sequence records to a DCF file), domainsse (adds secondary structure
records to a DCF file), scopparse (generates DCF file from raw SCOP files) and
ssematch (searches a DCF file for secondary structure matches).
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