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Source: embassy-domalign
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Charles Plessy <plessy@debian.org>,
Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper (>= 10),
emboss-lib (>= 6.6.0-1~),
emboss-lib (<< 6.6.1~),
libx11-dev,
libgd2-xpm-dev,
default-libmysqlclient-dev,
libpq-dev
Standards-Version: 3.9.8
Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/embassy-domalign/trunk/
Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/embassy-domalign/trunk/
Homepage: http://emboss.sourceforge.net/apps/cvs/embassy/index.html#DOMALIGN
Package: embassy-domalign
Architecture: any
Depends: ${shlibs:Depends},
${misc:Depends},
emboss-lib (>= 6.6.0-1~),
emboss-lib (<< 6.6.1~)
Recommends: emboss
Suggests: embassy
Description: Extra EMBOSS commands for protein domain alignment
The DOMALIGN programs were developed by Jon Ison and colleagues at MRC HGMP
for their protein domain research. They are included as an EMBASSY package as
a work in progress.
.
Applications in the current domalign release are allversusall (sequence
similarity data from all-versus-all comparison), domainalign (generates
alignments (DAF file) for nodes in a DCF file), domainrep (reorders DCF file
to identify representative structures) and seqalign (extend alignments (DAF
file) with sequences (DHF file)).
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