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Source: embassy-domsearch
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Charles Plessy <plessy@debian.org>,
Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper (>= 10),
emboss-lib (>= 6.6.0-1~),
emboss-lib (<< 6.6.1~),
libx11-dev,
libgd2-xpm-dev,
default-libmysqlclient-dev,
libpq-dev
Standards-Version: 3.9.8
Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/embassy-domsearch/trunk/
Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/embassy-domsearch/trunk/
Homepage: http://emboss.sourceforge.net/apps/cvs/embassy/index.html#DOMSEARCH
Package: embassy-domsearch
Architecture: any
Depends: ${shlibs:Depends},
${misc:Depends},
emboss-lib (>= 6.6.0-1~),
emboss-lib (<< 6.6.1~)
Recommends: emboss
Suggests: embassy
Description: Extra EMBOSS commands to search for protein domains
The DOMSEARCH programs were developed by Jon Ison and colleagues at MRC HGMP
for their protein domain research. They are included as an EMBASSY package as
a work in progress.
.
Applications in this DOMSEARCH release are seqfraggle (removes fragment
sequences from DHF files), seqnr (removes redundancy from DHF files), seqsearch
(generates PSI-BLAST hits (DHF file) from a DAF file), seqsort (Remove
ambiguous classified sequences from DHF files) and seqwords (Generates DHF
files from keyword search of UniProt).
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