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Source: embassy-phylip
Section: non-free/science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
DM-Upload-Allowed: yes
Uploaders: Charles Plessy <plessy@debian.org>,
Andreas Tille <tille@debian.org>
Build-Depends:
debhelper (>= 9),
autotools-dev,
libxaw7-dev,
emboss-lib (>= 6.4.0-1~),
emboss-lib (<< 6.4.1~),
libgd2-xpm-dev,
libmysqlclient-dev,
libpq-dev
Standards-Version: 3.9.3
Homepage: http://emboss.sourceforge.net/apps/cvs/embassy/index.html#PHYLIPNEW
Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/embassy-phylip/trunk/
Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/embassy-phylip/trunk
Package: embassy-phylip
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}, emboss-lib (>= 6.4.0-1~), emboss-lib (<< 6.4.1~)
Description: EMBOSS conversions of the programs in the phylip package
This package is the adaptation of the PHYLIP package in which its
programs can operate with the biological sequence formats and databases
of the European Molecular Biology Open Software Suite (EMBOSS). The
software packages adapted for EMBOSS are called EMBASSY.
.
PHYLIP (the PHYLogeny Inference Package) is a package of programs for
inferring phylogenies (evolutionary trees). Methods that are available
in the package include parsimony, distance matrix, and likelihood
methods, including bootstrapping and consensus trees. Data types that
can be handled include molecular sequences, gene frequencies,
restriction sites and fragments, distance matrices, and discrete
characters.
.
The EMBASSY PHYLIP programs all have the prefix "f" to distinguish them
from the original programs and avoid namespace conflict.
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