1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
|
<HTML>
<HEAD>
<TITLE>
EMBOSS
</TITLE>
</HEAD>
<BODY BGCOLOR="#FFFFFF" text="#000000">
<table align=center border=0 cellspacing=0 cellpadding=0>
<tr><td valign=top>
<A HREF="/" ONMOUSEOVER="self.status='Go to the EMBOSS home page';return true"><img border=0 src="emboss_icon.jpg" alt="" width=150 height=48></a>
</td>
<td align=left valign=middle>
<b><font size="+6">
ALIGNMENT LOCAL
</font></b>
</td></tr>
</table>
<br>
<p>
<!--END OF HEADER-->
Local sequence alignment
<p>
<table border cellpadding=4 bgcolor="#FFFFF0">
<tr><th>Program name</th><th>Description</th></tr>
<tr>
<td><a href="matcher.html">matcher</a></td>
<td>
Finds the best local alignments between two sequences
</td>
</tr>
<tr>
<td><a href="seqmatchall.html">seqmatchall</a></td>
<td>
All-against-all comparison of a set of sequences
</td>
</tr>
<tr>
<td><a href="supermatcher.html">supermatcher</a></td>
<td>
Match large sequences against one or more other sequences
</td>
</tr>
<tr>
<td><a href="water.html">water</a></td>
<td>
Smith-Waterman local alignment
</td>
</tr>
<tr>
<td><a href="wordfinder.html">wordfinder</a></td>
<td>
Match large sequences against one or more other sequences
</td>
</tr>
<tr>
<td><a href="wordmatch.html">wordmatch</a></td>
<td>
Finds all exact matches of a given size between 2 sequences
</td>
</tr>
</table>
</BODY>
</HTML>
|
