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<HTML>

<HEAD>
  <TITLE>
  EMBOSS
  </TITLE>
</HEAD>
<BODY BGCOLOR="#FFFFFF" text="#000000">


<table align=center border=0 cellspacing=0 cellpadding=0>
<tr><td valign=top>
<A HREF="/" ONMOUSEOVER="self.status='Go to the EMBOSS home page';return true"><img border=0 src="emboss_icon.jpg" alt="" width=150 height=48></a>
</td>
<td align=left valign=middle>
<b><font size="+6">
PROTEIN 2D STRUCTURE
</font></b>
</td></tr>
</table>
<br>&nbsp;
<p>


<!--END OF HEADER-->





Protein secondary structure
<p>

<table border cellpadding=4 bgcolor="#FFFFF0">

<tr><th>Program name</th><th>Description</th></tr>

<tr>
<td><a href="garnier.html">garnier</a></td>
<td>
Predicts protein secondary structure
</td>
</tr>

<tr>
<td><a href="helixturnhelix.html">helixturnhelix</a></td>
<td>
Report nucleic acid binding motifs
</td>
</tr>

<tr>
<td><a href="hmoment.html">hmoment</a></td>
<td>
Hydrophobic moment calculation
</td>
</tr>

<tr>
<td><a href="pepcoil.html">pepcoil</a></td>
<td>
Predicts coiled coil regions
</td>
</tr>

<tr>
<td><a href="pepnet.html">pepnet</a></td>
<td>
Displays proteins as a helical net
</td>
</tr>

<tr>
<td><a href="pepwheel.html">pepwheel</a></td>
<td>
Shows protein sequences as helices
</td>
</tr>

<tr>
<td><a href="tmap.html">tmap</a></td>
<td>
Displays membrane spanning regions
</td>
</tr>

<tr>
<td><a href="../embassy/topo/topo.html">topo</a></td>
<td>
Draws an image of a transmembrane protein
</td>
</tr>


</table>



</BODY>
</HTML>