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<HTML>
<HEAD>
<TITLE>
EMBOSS
</TITLE>
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<table align=center border=0 cellspacing=0 cellpadding=0>
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<A HREF="/" ONMOUSEOVER="self.status='Go to the EMBOSS home page';return true"><img border=0 src="emboss_icon.jpg" alt="" width=150 height=48></a>
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<td align=left valign=middle>
<b><font size="+6">
PROTEIN COMPOSITION
</font></b>
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</table>
<br>
<p>
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Composition of protein sequences
<p>
<table border cellpadding=4 bgcolor="#FFFFF0">
<tr><th>Program name</th><th>Description</th></tr>
<tr>
<td><a href="backtranambig.html">backtranambig</a></td>
<td>
Back translate a protein sequence to ambiguous codons
</td>
</tr>
<tr>
<td><a href="backtranseq.html">backtranseq</a></td>
<td>
Back translate a protein sequence
</td>
</tr>
<tr>
<td><a href="charge.html">charge</a></td>
<td>
Protein charge plot
</td>
</tr>
<tr>
<td><a href="checktrans.html">checktrans</a></td>
<td>
Reports STOP codons and ORF statistics of a protein
</td>
</tr>
<tr>
<td><a href="compseq.html">compseq</a></td>
<td>
Count composition of dimer/trimer/etc words in a sequence
</td>
</tr>
<tr>
<td><a href="emowse.html">emowse</a></td>
<td>
Protein identification by mass spectrometry
</td>
</tr>
<tr>
<td><a href="freak.html">freak</a></td>
<td>
Residue/base frequency table or plot
</td>
</tr>
<tr>
<td><a href="iep.html">iep</a></td>
<td>
Calculates the isoelectric point of a protein
</td>
</tr>
<tr>
<td><a href="mwcontam.html">mwcontam</a></td>
<td>
Shows molwts that match across a set of files
</td>
</tr>
<tr>
<td><a href="mwfilter.html">mwfilter</a></td>
<td>
Filter noisy molwts from mass spec output
</td>
</tr>
<tr>
<td><a href="octanol.html">octanol</a></td>
<td>
Displays protein hydropathy
</td>
</tr>
<tr>
<td><a href="pepinfo.html">pepinfo</a></td>
<td>
Plots simple amino acid properties in parallel
</td>
</tr>
<tr>
<td><a href="pepstats.html">pepstats</a></td>
<td>
Protein statistics
</td>
</tr>
<tr>
<td><a href="pepwindow.html">pepwindow</a></td>
<td>
Displays protein hydropathy
</td>
</tr>
<tr>
<td><a href="pepwindowall.html">pepwindowall</a></td>
<td>
Displays protein hydropathy of a set of sequences
</td>
</tr>
</table>
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