# Makefile.in generated by automake 1.10 from Makefile.am.
# doc/programs/text/Makefile.  Generated from Makefile.in by configure.

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# even the implied warranty of MERCHANTABILITY or FITNESS FOR A
# PARTICULAR PURPOSE.




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pkgincludedir = $(includedir)/EMBOSS
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pkgdatadir = $(prefix)/share/$(PACKAGE)/doc/programs/text
ACLOCAL = ${SHELL} /m2/emboss/emboss/missing --run aclocal-1.10
AJAX_FIXED_ROOT = \"/m2/emboss/emboss/emboss\"
AMTAR = ${SHELL} /m2/emboss/emboss/missing --run tar
AR = ar
AUTOCONF = ${SHELL} /m2/emboss/emboss/missing --run autoconf
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AUTOMAKE = ${SHELL} /m2/emboss/emboss/missing --run automake-1.10
AWK = gawk
CC = gcc
CCDEPMODE = depmode=gcc3
CFLAGS =   -O2 -D__amd64__
CPP = gcc -E
CPPFLAGS = -DAJ_LinuxLF -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE  -DLENDIAN -DNO_AUTH
CXX = g++
CXXCPP = g++ -E
CXXDEPMODE = depmode=gcc3
CXXFLAGS = -g -O2 
CYGPATH_W = echo
DEFS = -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"EMBOSS\" -DVERSION=\"5.0.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DHAVE_DIRENT_H=1 -DSTDC_HEADERS=1 -DHAVE_UNISTD_H=1 -DGETPGRP_VOID=1 -DHAVE_STRFTIME=1 -DHAVE_FORK=1 -DHAVE_VFORK=1 -DHAVE_WORKING_VFORK=1 -DHAVE_WORKING_FORK=1 -DHAVE_VPRINTF=1 -DHAVE_MEMMOVE=1 -DHAVE_LIBM=1 -DPLD_png=1
DEPDIR = .deps
ECHO = echo
ECHO_C = 
ECHO_N = -n
ECHO_T = 
EGREP = /bin/grep -E
EMBOSS_TOP = /m2/emboss/emboss
EXEEXT = 
F77 = gfortran
FFLAGS = -g -O2
GREP = /bin/grep
HAVE_MEMMOVE = 
HAVE_STRERROR = 
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LN_S = ln -s
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MAKEINFO = ${SHELL} /m2/emboss/emboss/missing --run makeinfo
MKDIR_P = /bin/mkdir -p
NEEDAJAX = 
OBJEXT = o
PACKAGE = EMBOSS
PACKAGE_BUGREPORT = 
PACKAGE_NAME = 
PACKAGE_STRING = 
PACKAGE_TARNAME = 
PACKAGE_VERSION = 
PATH_SEPARATOR = :
PCRE_DATE = 21-May-2003
PCRE_LIB_VERSION = 0:1:0
PCRE_MAJOR = 4
PCRE_MINOR = 3
PCRE_POSIXLIB_VERSION = 0:0:0
PCRE_VERSION = 4.3
POSIX_MALLOC_THRESHOLD = -DPOSIX_MALLOC_THRESHOLD=10
RANLIB = ranlib
SED = /bin/sed
SET_MAKE = 
SHELL = /bin/sh
STRIP = strip
VERSION = 5.0.0
XLIB =  -L/usr/lib64 -lX11 
XMKMF = 
X_CFLAGS = 
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X_LIBS =  -L/usr/lib64
X_PRE_LIBS =  -lSM -lICE
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abs_srcdir = /m2/emboss/emboss/doc/programs/text
abs_top_builddir = /m2/emboss/emboss
abs_top_srcdir = /m2/emboss/emboss
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htmldir = ${docdir}
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install_sh = $(SHELL) /m2/emboss/emboss/install-sh
libdir = ${exec_prefix}/lib
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target_alias = 
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top_srcdir = ../../..
pkgdata_DATA = aaindexextract.txt abiview.txt acdc.txt acdlog.txt \
	acdpretty.txt acdtable.txt acdtrace.txt acdvalid.txt \
	antigenic.txt backtranambig.txt backtranseq.txt \
	banana.txt biosed.txt btwisted.txt cai.txt \
	chaos.txt charge.txt checktrans.txt chips.txt \
	cirdna.txt codcmp.txt codcopy.txt coderet.txt \
	complex.txt compseq.txt cons.txt \
	cpgplot.txt cpgreport.txt \
	cusp.txt cutgextract.txt cutseq.txt dan.txt dbiblast.txt \
	dbifasta.txt dbiflat.txt dbigcg.txt dbxfasta.txt dbxflat.txt \
	dbxgcg.txt degapseq.txt descseq.txt \
	diffseq.txt digest.txt distmat.txt dotmatcher.txt dotpath.txt \
	dottup.txt dreg.txt \
        edialign.txt einverted.txt embossdata.txt embossversion.txt \
	emma.txt emowse.txt entret.txt epestfind.txt eprimer3.txt \
	equicktandem.txt est2genome.txt etandem.txt extractfeat.txt \
	extractseq.txt findkm.txt freak.txt \
	fuzznuc.txt fuzzpro.txt fuzztran.txt garnier.txt geecee.txt \
	getorf.txt helixturnhelix.txt hmoment.txt \
	iep.txt infoalign.txt infoseq.txt isochore.txt

pkgdata2_DATA = jembossctl.txt lindna.txt listor.txt \
	makenucseq.txt makeprotseq.txt \
	marscan.txt maskfeat.txt maskseq.txt matcher.txt \
	megamerger.txt merger.txt msbar.txt \
	mwcontam.txt mwfilter.txt \
	needle.txt \
	newcpgreport.txt newcpgseek.txt newseq.txt noreturn.txt \
	notseq.txt nthseq.txt octanol.txt oddcomp.txt palindrome.txt \
	pasteseq.txt patmatdb.txt patmatmotifs.txt \
	pepcoil.txt pepinfo.txt pepnet.txt \
	pepstats.txt pepwheel.txt pepwindow.txt pepwindowall.txt \
	plotcon.txt plotorf.txt polydot.txt preg.txt prettyplot.txt \
	prettyseq.txt primersearch.txt printsextract.txt profit.txt \
	prophecy.txt prophet.txt prosextract.txt pscan.txt \
	psiphi.txt rebaseextract.txt recoder.txt redata.txt \
	remap.txt restover.txt restrict.txt revseq.txt \
	seealso.txt seqmatchall.txt seqret.txt \
	seqretsplit.txt \
	showalign.txt showdb.txt showfeat.txt showorf.txt \
	showseq.txt shuffleseq.txt sigcleave.txt silent.txt \
	sirna.txt SITE-DIRECTED.txt sixpack.txt \
	skipseq.txt splitter.txt stretcher.txt stssearch.txt \
	supermatcher.txt syco.txt tcode.txt textsearch.txt \
	tfextract.txt tfm.txt tfscan.txt tmap.txt \
	tranalign.txt transeq.txt trimest.txt trimseq.txt \
	twofeat.txt union.txt vectorstrip.txt \
	water.txt whichdb.txt wobble.txt \
	wordcount.txt wordfinder.txt wordmatch.txt \
	wossname.txt yank.txt

pkgdata2dir = $(prefix)/share/$(PACKAGE)/doc/programs/text
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