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<HTML>
<HEAD>
<TITLE>
EMBOSS
</TITLE>
</HEAD>
<BODY BGCOLOR="#FFFFFF" text="#000000">
<table align=center border=0 cellspacing=0 cellpadding=0>
<tr><td valign=top>
<A HREF="/" ONMOUSEOVER="self.status='Go to the EMBOSS home page';return true"><img border=0 src="emboss_icon.jpg" alt="" width=150 height=48></a>
</td>
<td align=left valign=middle>
<b><font size="+6">
DATA RETRIEVAL SEQUENCE DATA
</font></b>
</td></tr>
</table>
<br>
<p>
<!--END OF HEADER-->
Sequence data retrieval
<p>
<table border cellpadding=4 bgcolor="#FFFFF0">
<tr><th>Program name</th><th>Description</th></tr>
<tr>
<td><a href="abiview.html">abiview</a></td>
<td>
Display the trace in an ABI sequencer file
</td>
</tr>
<tr>
<td><a href="coderet.html">coderet</a></td>
<td>
Extract CDS, mRNA and translations from feature tables
</td>
</tr>
<tr>
<td><a href="entret.html">entret</a></td>
<td>
Retrieve sequence entries from flatfile databases and files
</td>
</tr>
<tr>
<td><a href="extractalign.html">extractalign</a></td>
<td>
Extract regions from a sequence alignment
</td>
</tr>
<tr>
<td><a href="infoalign.html">infoalign</a></td>
<td>
Display basic information about a multiple sequence alignment
</td>
</tr>
<tr>
<td><a href="infoseq.html">infoseq</a></td>
<td>
Display basic information about sequences
</td>
</tr>
<tr>
<td><a href="refseqget.html">refseqget</a></td>
<td>
Get reference sequence
</td>
</tr>
<tr>
<td><a href="seqxref.html">seqxref</a></td>
<td>
Retrieve all database cross-references for a sequence entry
</td>
</tr>
<tr>
<td><a href="seqxrefget.html">seqxrefget</a></td>
<td>
Retrieve all cross-referenced data for a sequence entry
</td>
</tr>
<tr>
<td><a href="showalign.html">showalign</a></td>
<td>
Display a multiple sequence alignment in pretty format
</td>
</tr>
<tr>
<td><a href="variationget.html">variationget</a></td>
<td>
Get sequence variations
</td>
</tr>
<tr>
<td><a href="whichdb.html">whichdb</a></td>
<td>
Search all sequence databases for an entry and retrieve it
</td>
</tr>
</table>
</BODY>
</HTML>
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