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EMBOSS
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<A HREF="/" ONMOUSEOVER="self.status='Go to the EMBOSS home page';return true"><img border=0 src="emboss_icon.jpg" alt="" width=150 height=48></a>
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<b><font size="+6">
NUCLEIC GENE FINDING
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Predictions of genes and other genomic features
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<tr><th>Program name</th><th>Description</th></tr>
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<td><a href="checktrans.html">checktrans</a></td>
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Report STOP codons and ORF statistics of a protein
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<td><a href="getorf.html">getorf</a></td>
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Find and extract open reading frames (ORFs)
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<td><a href="marscan.html">marscan</a></td>
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Find matrix/scaffold recognition (MRS) signatures in DNA sequences
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<td><a href="plotorf.html">plotorf</a></td>
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Plot potential open reading frames in a nucleotide sequence
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<td><a href="showorf.html">showorf</a></td>
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Display a nucleotide sequence and translation in pretty format
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<td><a href="sixpack.html">sixpack</a></td>
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Display a DNA sequence with 6-frame translation and ORFs
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<td><a href="syco.html">syco</a></td>
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Draw synonymous codon usage statistic plot for a nucleotide sequence
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<td><a href="tcode.html">tcode</a></td>
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Identify protein-coding regions using Fickett TESTCODE statistic
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<td><a href="wobble.html">wobble</a></td>
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Plot third base position variability in a nucleotide sequence
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