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>>>>Z11115
ID Z11115 standard; DNA; INV; 40699 BP.
XX
AC Z11115;
XX
NI g6953
XX
DT 04-MAY-1991 (Rel. 28, Created)
DT 31-JUL-1998 (Rel. 56, Last updated, Version 43)
XX
DE Caenorhabditis elegans cosmid ZK637
XX
KW HTG.
XX
OS Caenorhabditis elegans
OC Eukaryota; Metazoa; Nematoda; Secernentea; Rhabditia; Rhabditida;
OC Rhabditina; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.
XX
RN [1]
RP 1-40699
RA Craxton M.;
RT ;
RL Submitted (03-MAY-1991) to the EMBL/GenBank/DDBJ databases.
RL Louis, MO 63110, USA. E-mail: jes@sanger.ac.uk or rw@nematode.wustl.edu
XX
RN [2]
RA Wilson R., Ainscough R., Anderson K., Baynes C., Berks M., Bonfield J.,
RA Burton J., Connell M., Copsey T., Cooper J., Coulson A., Craxton M.,
RA Dear S., Du Z., Durbin R., Favello A., Fulton L., Gardner A., Green P.,
RA Hawkins T., Hillier L., Jier M., Johnston L., Jones M., Kershaw J.,
RA Kirsten J., Laister N., Latreille P., Lightning J., Lloyd C.,
RA McMurray A., Mortimore B., O'Callaghan M., Parsons J., Percy C.,
RA Rifken L., Roopra A., Saunders D., Shownkeen R., Smaldon N., Smith A.,
RA Sonnhammer E., Staden R., Sulston J., Thierry-Mieg J., Thomas K.,
RA Vaudin M., Vaughan K., Waterston R., Watson A., Weinstock L.,
RA Wilkinson-Sproat J., Wohldman P.;
RT "2.2 Mb of contiguous nucleotide sequence from chromosome III of C.
RT elegans";
RL Nature 368:32-38(1994).
XX
DR SPTREMBL; Q23555; Q23555.
DR SPTREMBL; Q23556; Q23556.
DR SWISS-PROT; P30627; GLBH_CAEEL.
DR SWISS-PROT; P30628; VPP1_CAEEL.
DR SWISS-PROT; P30629; YOU2_CAEEL.
DR SWISS-PROT; P30630; LIN9_CAEEL.
DR SWISS-PROT; P30631; YOUD_CAEEL.
DR SWISS-PROT; P30632; YOU5_CAEEL.
DR SWISS-PROT; P30634; YOUA_CAEEL.
DR SWISS-PROT; P30635; GSHR_CAEEL.
DR SWISS-PROT; P30636; YOU9_CAEEL.
DR SWISS-PROT; P30637; YOU4_CAEEL.
DR SWISS-PROT; P30638; YOU1_CAEEL.
DR SWISS-PROT; P30639; YOU3_CAEEL.
DR SWISS-PROT; P34658; YOUB_CAEEL.
XX
CC Current sequence finishing criteria for the C. elegans genome
CC sequencing consortium are that all bases are either sequenced
CC unambiguously on both strands, or on a single strand with both
CC a dye primer and dye terminator reaction, from distinct
CC subclones. Exceptions are indicated by an explicit note.
XX
CC IMPORTANT: This sequence is NOT necessarily the entire insert
CC of clone ZK637. It may be shorter because we only sequence
CC overlapping sections once, or longer because we arrange for a
CC small overlap between neighbouring submissions.
CC Coding sequences below are predicted from computer analysis,
CC using the program Genefinder (P. Green, ms in preparation),
CC and other available information.
CC The start of this sequence (1. .180) overlaps with the end of
CC sequence CEK01F9.
CC The end of this sequence (40696. .40699) overlaps with the start of
CC sequence CEZK643.
XX
FH Key Location/Qualifiers
FH
FT source 1. .40699
FT /organism="Caenorhabditis elegans"
FT /chromosome="III"
FT /clone="ZK637"
FT CDS join(complement(5021. .5078),complement(4825. .4974),
FT complement(4451. .4728))
FT /db_xref="PID:g1067096"
FT /db_xref="SWISS-PROT:P30631"
FT /note="protein predicted using Genefinder"
FT /note="similar to HSV11 IE110"
FT /product="ZK637.14"
FT /translation="MSERDAIRAFSHMLETIFVRMRAEGTGSQTDAMQRWLDLYNVGSL
FT PIDKKSYKALRLMDRETTDQQKEDATCAICLDNLQNNVDIPEDHVIKEELKIDPTTFGT
FT TVIVMPCKHRFHYFCLTLWLEAQQTCPTCRQKVKTDKEVEEEERQRNLEELHDSMYG"
FT CDS complement(15286. .15486)
FT /db_xref="PID:e80845"
FT /note="ArsA homologous, pseudogene?"
FT /pseudo
FT /product="ZK637.6"
FT /translation="GVGKTTGSCSLATQLSKVRESVLIVSTDTAHKISDAFSQEFTKFP
FT TLVEGFKNLFVMEIDSKPDGED"
FT CDS join(21664. .21816,21898. .22074,22182. .22310,22560. .22844,
FT 23347. .23468,23629. .23838,23893. .25147,25269. .25391,
FT 26117. .26257,26370. .26589,26754. .26925,27145. .27250)
FT /db_xref="PID:g1067097"
FT /db_xref="SWISS-PROT:P30628"
FT /note="protein predicted using Genefinder"
FT /note="TJ6/proton pump homologue, exon 4 is alternatively
FT spliced"
FT /note="cDNA EST cm08g12 comes from this gene"
FT /note="cDNA EST yk11a12.3 comes from this gene"
FT /note="cDNA EST yk11a12.5 comes from this gene"
FT /note="cDNA EST yk15a11.3 comes from this gene"
FT /note="cDNA EST yk15a11.5 comes from this gene"
FT /note="cDNA EST yk20d9.5 comes from this gene"
FT /note="cDNA EST yk39g5.3 comes from this gene"
FT /note="cDNA EST yk39g5.5 comes from this gene"
FT /note="cDNA EST yk42b11.3 comes from this gene"
FT /note="cDNA EST yk5d7.3 comes from this gene"
FT /note="cDNA EST yk5d7.5 comes from this gene"
FT /note="cDNA EST yk119c7.3 comes from this gene"
FT /note="cDNA EST yk119c7.5 comes from this gene"
FT /note="cDNA EST yk244c11.3 comes from this gene"
FT /note="cDNA EST yk244c11.5 comes from this gene"
FT /product="ZK637.8a"
FT /translation="MGDYVTPGEEPPQPGIYRSEQMCLAQLYLQSDASYQCVAELGELG
FT LVQFRDLNPDVSSFQRKYVNEVRRCDEMERKLRYLEREIKKDQIPMLDTGENPDAPLPR
FT EMIDLEATFEKLENELREVNKNEETLKKNFSELTELKHILRKTQTFFEEVDHDRWRILE
FT GGSGRRGRSTEREETRPLIDIGDMDDDSAARMSAQAAMLRLGYVVLGKMDRPESATIAK
FT RDLVYVVLFVSFSFCIPLVFFPDSFLHEDMIASSAESSGIGEVLSADEEELSGRFSDAM
FT SPLKLQLRFVAGVIQRERLPAFERLLWRACRGNVFLRTSEIDDVLNDTVTGDPVNKCVF
FT IIFFQGDHLKTKVKKICEGFRATLYPCPDTPQERREMSIGVMTRIEDLKTVLGQTQDHR
FT HRVLVAASKNVRMWLTKVRKIKSIYHTLNLFNIDVTQKCLIAEVWCPIAELDRIKMALK
FT RGTDESGSQVPSILNRMETNEAPPTYNKTNKFTKGFQNIVDAYGIATYREINPAPYTMI
FT SFPFLFAVMFGDMGHGAIMLLAALFFILKEKQLEAARIKDEIFQTFFGGRYVIFLMGAF
FT SIYTGFMYNDVFSKSINTFGSSWQNTIPESVIDYYLDDEKRSESQLILPPETAFDGNPY
FT PIGVDPVWNLAEGNKLSFLNSMKMKMSVLFGIAQMTFGVLLSYQNFIYFKSDLDIKYMF
FT IPQMIFLSSIFIYLCIQILSKWLFFGAVGGTVLGYKYPGSNCAPSLLIGLINMFMMKSR
FT NAGFVDDSGETYPQCYLSTWYPGQSFFETIFVLVAIACVPVMLFGKPYFLWKEEKERRE
FT GGHRQLATIEIILVVLALVQVPIMLFAKPYFLYRRDKQQSRYSTLTAESNQHQSVRADI
FT NQDDAEVVHAPEQTPKPSGHGHGHGDGPLEMGDVMVYQAIHTIEFVLGCVSHTASYLRL
FT WALSLAHAQLSDVLWTMVFRNAFVLDGYTGAIATYILFFIFGSLSVFILVLMEGLSAFL
FT HALRLHWVEFQSKFYGGLGYEFAPFSFEKILAEEREAEENL"
FT CDS join(3794. .3918,4033. .4240)
FT /db_xref="PID:g6955"
FT /db_xref="SWISS-PROT:P30629"
FT /note="protein predicted using Genefinder"
FT /product="ZK637.2"
FT /translation="MSNSTMEATQMKVKLAVDEMIDDLDKTYLRDMQKSMFQCSARCCD
FT NKKTTRDAVENCVESCNDGMKKAQGYLEKELGGLQDQLSRCAMTCYDKLVQQFGPDVNK
FT YSESQV"
FT CDS join(6271. .6465,6523. .6642,7346. .7658,7714. .7775,
FT 7824. .8153,8767. .9252,9311. .9472,9779. .9910)
FT /db_xref="PID:g6957"
FT /db_xref="SWISS-PROT:P30639"
FT /note="protein predicted using Genefinder"
FT /product="ZK637.3"
FT /translation="MKKILPIIWLINLVSGSLSLEKKAPDLLGKVCAFGDFNADRNTDI
FT LVFANGTLTINYQETKLLDVLEASKFTPGTSFAISKPSLNADFVECSVGDFNGDSRLDV
FT LVSIRDKDTEIYNHTLWTSEIEDEKEIFRPFHVAMLQQHAMAIDVSDDGWTDVLGFYPN
FT GSMFCTGFNKEGKYNLLVNGCKHEFVAFPEKLNIYPGMPHLFVDLNSDLIADIVFMTKE
FT SDGSLFMSVWQKTKISWQFRDWVPKLTPAQYPFVGAPVVMDVDSDGELDILVPICREDE
FT CSHITQMASWSKTKLWGLVACDMQDYTVIKEPFSRVIFRVGEFSLDSFPDMVVIAQATR
FT ANTRPVIKVMDNAECTKCEKNGTRRFEIRAQENIQPKNMSLGVIKMGTFFDLLEDGSLD
FT LLVEYEYGGQTRFGFIYCPDKGDTTFLKVQVFTGVCSDRCNPKSNEIGSSISMTGACAS
FT FSMTDGWGGSTQSVACQVPASSNRALYLPFLLYGLGRSPNFVDELNIAIPKYADRKEDW
FT KHSLKQIVPNSRIIVLPPSDQYPHWTSRLYVTPSALIVQSLAVIALVCCMLLMVVVFLH
FT YREKKEDRYERQQQSHRFHFDAM"
FT CDS join(10248. .10316,10369. .10436,10486. .10539,10595. .10691)
FT /db_xref="PID:g6958"
FT /db_xref="SWISS-PROT:P30637"
FT /note="protein predicted using Genefinder"
FT /product="ZK637.4"
FT /translation="MKSNPKYFLMNDVERQSKYSPKYVPNNSLKERILEFLDYYIAPLK
FT LYLLSYPMPDCLWDNRKLRLKASGVQVTPSSEPVHIDDRLIHISQKQPSE"
FT CDS join(11124. .11557,11606. .11864,12073. .12282,12411. .12536)
FT /db_xref="PID:g6959"
FT /db_xref="SWISS-PROT:P30632"
FT /note="protein predicted using Genefinder"
FT /note="ArsA homologue"
FT /note="cDNA EST yk140f3.3 comes from this gene"
FT /note="cDNA EST yk176c11.3 comes from this gene"
FT /note="cDNA EST yk140f3.5 comes from this gene"
FT /note="cDNA EST yk176c11.5 comes from this gene"
FT /note="cDNA EST yk62f10.3 comes from this gene"
FT /note="cDNA EST yk62f10.5 comes from this gene"
FT /note="cDNA EST yk221f9.3 comes from this gene"
FT /note="cDNA EST yk221f9.5 comes from this gene"
FT /product="ZK637.5"
FT /translation="MSDQLEASIKNILEQKTLKWIFVGGKGGVGKTTCSCSLAAQLSKV
FT RERVLLISTDPAHNISDAFSQKFTKTPTLVEGFKNLFAMEIDSNPNGEGVEMGNIEEML
FT QNAAQNEGGSGGFSMGKDFLQSFAGGLPGIDEAMSFGEMIKLIDSLDFDVVVFDTAPTG
FT HTLRLLQFPTLLEKVFTKILSLQGMFGPMMNQFGGMFGMGGGSMNEMIEKMTTTLESVK
FT KMNAQFKDPNCTTFVCVCIAEFLSLYETERLIQELSKQGIDTHNIIVNQLLFPDTDANG
FT TVSCRKCASRQAIQSKYLTDIDELYEDFHVVKLPLLEAEVRGGPAILQFSERMVDPEAN
FT KN"
FT CDS join(21664. .21816,21898. .22074,22182. .22310,23347. .23468,
FT 23629. .23838,23893. .25147,25269. .25391,26117. .26257,
FT 26370. .26589,26754. .26925,27145. .27250)
FT /db_xref="PID:g6961"
FT /db_xref="SPTREMBL:Q23555"
FT /product="ZK637.8b"
FT /translation="MGDYVTPGEEPPQPGIYRSEQMCLAQLYLQSDASYQCVAELGELG
FT LVQFRDLNPDVSSFQRKYVNEVRRCDEMERKLRYLEREIKKDQIPMLDTGENPDAPLPR
FT EMIDLEATFEKLENELREVNKNEETLKKNFSELTELKHILRKTQTFFEEHEDMIASSAE
FT SSGIGEVLSADEEELSGRFSDAMSPLKLQLRFVAGVIQRERLPAFERLLWRACRGNVFL
FT RTSEIDDVLNDTVTGDPVNKCVFIIFFQGDHLKTKVKKICEGFRATLYPCPDTPQERRE
FT MSIGVMTRIEDLKTVLGQTQDHRHRVLVAASKNVRMWLTKVRKIKSIYHTLNLFNIDVT
FT QKCLIAEVWCPIAELDRIKMALKRGTDESGSQVPSILNRMETNEAPPTYNKTNKFTKGF
FT QNIVDAYGIATYREINPAPYTMISFPFLFAVMFGDMGHGAIMLLAALFFILKEKQLEAA
FT RIKDEIFQTFFGGRYVIFLMGAFSIYTGFMYNDVFSKSINTFGSSWQNTIPESVIDYYL
FT DDEKRSESQLILPPETAFDGNPYPIGVDPVWNLAEGNKLSFLNSMKMKMSVLFGIAQMT
FT FGVLLSYQNFIYFKSDLDIKYMFIPQMIFLSSIFIYLCIQILSKWLFFGAVGGTVLGYK
FT YPGSNCAPSLLIGLINMFMMKSRNAGFVDDSGETYPQCYLSTWYPGQSFFETIFVLVAI
FT ACVPVMLFGKPYFLWKEEKERREGGHRQLATIEIILVVLALVQVPIMLFAKPYFLYRRD
FT KQQSRYSTLTAESNQHQSVRADINQDDAEVVHAPEQTPKPSGHGHGHGDGPLEMGDVMV
FT YQAIHTIEFVLGCVSHTASYLRLWALSLAHAQLSDVLWTMVFRNAFVLDGYTGAIATYI
FT LFFIFGSLSVFILVLMEGLSAFLHALRLHWVEFQSKFYGGLGYEFAPFSFEKILAEERE
FT AEENL"
FT CDS join(complement(20104. .20160),complement(19876. .19994),
FT complement(19694. .19826),complement(19132. .19647),
FT complement(18848. .19006),complement(17962. .18372),
FT complement(17779. .17883),complement(17657. .17732),
FT complement(17524. .17582),complement(16630. .16827))
FT /db_xref="PID:g6960"
FT /db_xref="SWISS-PROT:P30630"
FT /note="protein predicted using Genefinder"
FT /note="cDNA EST yk12h1.3 comes from this gene"
FT /note="cDNA EST yk12h1.5 comes from this gene"
FT /note="cDNA EST yk24e1.3 comes from this gene"
FT /note="cDNA EST yk24e1.5 comes from this gene"
FT /note="cDNA EST yk34b2.3 comes from this gene"
FT /note="cDNA EST yk34b2.5 comes from this gene"
FT /note="cDNA EST yk220e8.3 comes from this gene"
FT /note="cDNA EST yk212f5.3 comes from this gene"
FT /note="cDNA EST yk224d7.3 comes from this gene"
FT /note="cDNA EST yk270e5.3 comes from this gene"
FT /note="cDNA EST yk353h6.3 comes from this gene"
FT /note="cDNA EST yk220e8.5 comes from this gene"
FT /note="cDNA EST yk212f5.5 comes from this gene"
FT /note="cDNA EST yk224d7.5 comes from this gene"
FT /note="cDNA EST yk270e5.5 comes from this gene"
FT /note="cDNA EST yk353h6.5 comes from this gene"
FT /product="ZK637.7"
FT /gene="lin-9"
FT /translation="MSSAVRSPRKKAASDTSDPDRTSSPYSLRETSKVPSRYRNEELYL
FT SPSRSIKRTGSPKKSPAKRLNGGRDSPSVNSLTRNSSLTMLAKAALDYESSSCALEYIP
FT KEERRPPRRALALSPPPAPSNDLLAKDLEMIEMHQNLVAGLDDLDNPANMTNEAVEHRD
FT TQSFFNMFSTDQERSAMMKQFKTYKNQTSEDVSTFMRANIKKLYNLLRYKKARQWVMCE
FT FFYSAIDEQIFKEENEFATIIRESFPNLKNWNLTRIEWRSIRKLLGKPRRCSKDPSIDL
FT KDLPAKLPRPMVVGNRVFARIRNPYDGIYSGIIDAVIPKGFRIIFDKPDIPPTLVSDTE
FT ILLDGKLDLLSIAYFIEQANSKLPSGVRPFVAAVRDSSHPHLVRDVLVSRKIERSGGPL
FT MGPNDERLNGKNAEMVGNFPLKFLVNLVKLTKLIDIKKGLIRQLNELNADAEIQNMTSD
FT KYSKAFQEKYAKTIIDLEHVNQNIDINMNGIQDHHMYFSSNDISTSNMKPEAVRQMCSQ
FT QAGRFVEHCLWHYRLQNNNLLMKKKIENVRTMGTQKISAVDLQSLGDAISEIRTAIHPR
FT NVAFFQDYVEVHMKQFHTIMLESGALAGTVSNRK"
FT CDS join(28186. .28352,28407. .28487,28897. .29083,29173. .29253,
FT 29334. .29405)
FT /db_xref="PID:g6962"
FT /db_xref="SWISS-PROT:P30636"
FT /note="protein predicted using Genefinder"
FT /product="ZK637.9"
FT /translation="MSKKLKPFEILEDSCASVCIWLNGEPTAISNRAENLWNKAKYRVA
FT TDGAVNEILKRKSFVEWPHIICGDFDSINKQIDTKNAKVVHLPDQDYTDLSKSVQWCLE
FT QKTLTSWEFENIVVLGGLNGRFDHTMSTLSSLIRFVDSQTPGDSNLDVNLEMTTKMCGI
FT IPIVQKETIKTLLLNLENLSARRMKLPRAKYF"
FT CDS join(complement(33832. .33932),complement(33415. .33784),
FT complement(32541. .33020))
FT /db_xref="PID:g6964"
FT /db_xref="SWISS-PROT:P30634"
FT /note="protein predicted using Genefinder"
FT /note="similar to CDC25/string"
FT /product="ZK637.11"
FT /translation="MCVDVPCENCIVRNDGLRLKCSECAEGSSKLFPRQNRQHSSAISH
FT ISNSSPPTRKRSIDGGYTSGTDSANTSEIVIKKRLTFSKKSHSTSEIETWNAHLQVDYH
FT LETVTPSCSTVYQKITSETLIEIMQKLSQIEFMQKYILIDCRYDYEYNGGHIKGAQSLF
FT NPETAADFFFNKDGSKKINRIPIFYCEYSQKRGPTMANNLREVDRKLNSNIYPRCDYEE
FT IYLLEGGYKNFYAFTRGLEKEQRVQLCEPDNYVIMFDDRYKAELRKHQFHKKNVSKPMK
FT KWSSTTSVISILTTSGTRISTLRQTCDPIHEHDAH"
FT CDS join(36246. .36305,36470. .36667,36886. .36987,37038. .37196)
FT /db_xref="PID:e249697"
FT /db_xref="SPTREMBL:Q23556"
FT /note="protein predicted using Genefinder"
FT /note="cDNA EST yk65f9.5 comes from this gene"
FT /product="ZK637.15"
FT /translation="MDNEKLIREARRMEDVQQLKMQIPKPVDKKPRPPPSENNLKLISC
FT EETCMDETLKNSSKPRMIYNKQLGRAESIDFDVPSLSYESSTFKKSNNSSGGALVLDNH
FT YLINNDDGTVKKLPMKVYVKQRLEDGSLDVQLVFFDENSQKVMDISMLVNGKKIRNVQF
FT CGKDGKLVN"
FT CDS join(complement(39128. .39321),complement(38544. .38829))
FT /db_xref="PID:g6965"
FT /db_xref="SWISS-PROT:P30627"
FT /note="protein predicted using Genefinder"
FT /note="similar to globins"
FT /note="cDNA EST yk138h12.5 comes from this gene"
FT /note="cDNA EST yk66b9.3 comes from this gene"
FT /note="cDNA EST yk476d2.3 comes from this gene"
FT /product="ZK637.13"
FT /translation="MSMNRQEISDLCVKSLEGRMVGTEAQNIENGNAFFRYFFTNFPDL
FT RVYFKGAEKYTADDVKKSERFDKQGQRILLACHLLANVYTNEEVFKGYVRETINRHRIY
FT KMDPALWMAFFTVFTGYLESVGCLNDQQKAAWMALGKEFNAESQTHLKNSNLPHV"
FT CDS join(29817. .30077,30126. .30262,30309. .30393,30743. .31279,
FT 31330. .31672,32242. .32390)
FT /db_xref="PID:e317392"
FT /db_xref="SWISS-PROT:P30635"
FT /note="protein predicted using Genefinder"
FT /note="similar to glutathione reductase"
FT /note="cDNA EST yk156d3.5 comes from this gene"
FT /product="ZK637.10"
FT /translation="MLLSTFKRHLPIRRLFSSNKFDLIVIGAGSGGLSCSKRAADLGAN
FT VALIDAVEPTPHGHSWGIGGTCANVGCIPKKLMHQAAIVGKELKHADKYGWNGIDQEKI
FT KHDWNVLSKNVNDRVKANNWIYRVQLNQKKINYFNAYAEFVDKDKIVITGTDKNKTKNF
FT LSAPNVVISTGLRPKYPNIPGAELGITSDDLFTLASVPGKTLIVGGGYVALECAGFLSA
FT FNQNVEVLVRSIPLKGFDRDCVHFVMEHLKTTGVKVKEHVEVERVEAVGSKKKVTFTGN
FT GGVEEYDTVIWAAGRVPNLKSLNLDNAGVRTDKRSGKILADEFDRASCNGVYAVGDIVQ
FT DRQELTPLAIQSGKLLADRLFSNSKQIVRFDGVATTVFTPLELSTVGLTEEEAIQKHGE
FT DSIEVFHSHFTPFEYVVPQNKDSGFCYVKAVCTRDESQKILGLHFVGPNAAEVIQGYAV
FT AFRVGISMSDLQNTIAIHPCSSEEFVKLHITKRSGQDPRTQGCCG"
FT CDS join(complement(1418. .1509),complement(1188. .1374),
FT complement(787. .870),complement(660. .746),
FT complement(486. .610),complement(238. .427),
FT complement(<1. .137))
FT /db_xref="PID:g6954"
FT /db_xref="SWISS-PROT:P30638"
FT /note="protein predicted using Genefinder"
FT /note="similar to Sugar transporter"
FT /product="ZK637.1"
FT /translation="MGDKAILTEVLEASNLTEAYVDLTAKQLIKEIRHVGDDFAVRYSN
FT LDDRTELGEPTDQRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLS
FT LISPALACEWGISSVQQALVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFSTLVACIMG
FT VISGMSPHFYVLLFFRGLTGFGIGGVPQSVTLYAEFLPTAQRAKCVVLIESFWAIGAVF
FT EALLAYFVMESFGWRALMFLSSLPLGIFAVASFWLPESARFDMASGHPERALETLQAAA
FT RMNRVQLPTGRLVSSTKAGS"
FT CDS join(40427. .40486,40571. .>40699)
FT /db_xref="PID:e228925"
FT /db_xref="SWISS-PROT:P34658"
FT /note="cDNA EST yk65f9.5 comes from this gene"
FT /product="ZK637.12"
FT /translation="MDNEKLIREARRMEEVQQLKMQIPKPVDKKPRPPPSENNLKLISC
FT EETCMDETLKNSSKPRMI"
XX
SQ Sequence 40699 BP; 12909 A; 7116 C; 7279 G; 13395 T; 0 other;
>>>>X07797
ID X07797 standard; RNA; INV; 1675 BP.
XX
AC X07797;
XX
NI g9822
XX
DT 01-AUG-1988 (Rel. 17, Created)
DT 17-FEB-1997 (Rel. 50, Last updated, Version 4)
XX
DE Octopus mRNA for rhodopsin
XX
KW rhodopsin.
XX
OS Octopus dofleini
OC Eukaryota; Metazoa; Mollusca; Cephalopoda; Coleoidea; Octopoda;
OC Incirrata; Octopodidae; Octopus.
XX
RN [1]
RP 1-1675
RA Ovchinnikov Y.A., Abdulaev N.G., Zolotarev A.S., Artamonov I.D.,
RA Bespalov I.A., Dergachev A.E., Tsuda M.;
RT "Octopus rhodopsin - Amino acid sequence deduced from cDNA";
RL FEBS Lett. 232:69-72(1988).
XX
RN [2]
RP 1-1675
RA Abdulaev N.G.;
RT ;
RL Submitted (25-OCT-1988) to the EMBL/GenBank/DDBJ databases.
XX
DR SWISS-PROT; P09241; OPSD_OCTDO.
XX
CC Data kindly reviewed (25-OCT-1988) by Abdulaev N.G.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1675
FT /organism="Octopus dofleini"
FT /clone="pORh462"
FT CDS 75. .1442
FT /db_xref="PID:g9823"
FT /db_xref="SWISS-PROT:P09241"
FT /product="rhodopsin"
FT /translation="MVESTTLVNQTWWYNPTVDIHPHWAKFDPIPDAVYYSVGIFIGVV
FT GIIGILGNGVVIYLFSKTKSLQTPANMFIINLAMSDLSFSAINGFPLKTISAFMKKWIF
FT GKVACQLYGLLGGIFGFMSINTMAMISIDRYNVIGRPMAASKKMSHRRAFLMIIFVWMW
FT SIVWSVGPVFNWGAYVPEGILTSCSFDYLSTDPSTRSFILCMYFCGFMLPIIIIAFCYF
FT NIVMSVSNHEKEMAAMAKRLNAKELRKAQAGASAEMKLAKISMVIITQFMLSWSPYAII
FT ALLAQFGPAEWVTPYAAELPVLFAKASAIHNPIVYSVSHPKFREAIQTTFPWLLTCCQF
FT DEKECEDANDAEEEVVASERGGESRDAAQMKEMMAMMQKMQAQQAAYQPPPPPQGYPPQ
FT GYPPQGAYPPPQGYPPQGYPPQGYPPQGYPPQGAPPQVEAPQGAPPQGVDNQAYQA"
FT old_sequence 1270
FT /citation=[1]
FT /replace="c"
FT polyA_site 1675. .1675
FT /note="polyA site"
XX
SQ Sequence 1675 BP; 479 A; 406 C; 330 G; 460 T; 0 other;
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