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#!/bin/csh -x
#######################################
cd ~emboss/CURRENT/$1/EMBOSS-0.0.4
mkdir ~emboss/CURRENT/$1/EMBOSS-0.0.4/embassy
cd ~emboss/CURRENT/$1/EMBOSS-0.0.4/embassy
cp ~emboss/CURRENT/OSF/emboss/embassy/mse/MSE*.tar.gz .
cp ~emboss/CURRENT/OSF/emboss/embassy/phylip/PHYLIP*.tar.gz .
cp ~emboss/CURRENT/OSF/emboss/embassy/topo/TOPO*.tar.gz .
gunzip MSE*.tar.gz
tar xvf MSE*
rm -f MSE*.tar
gunzip PHYLIP*.tar.gz
tar xvf PHYLIP*
rm -f PHYLIP*.tar
gunzip TOPO*.tar.gz
tar xvf TOPO*
rm -f TOPO*.tar
foreach t (MSE-0.0.4 PHYLIP-3.573c TOPO-0.1)
cd $t
if($1 == "SGI-PURE") then
setenv CC cc
./configure --disable-shared --enable-purify
else
./configure --disable-shared --enable-debug
endif
if ( ! { make } ) then
echo "Failed $t-build on `hostname` in `pwd`"
make |& \
rsh europa fold -w 77 "|" Mail -s \"$t make failed on $1\" il@sanger.ac.uk
endif
cd ..
end
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