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#!/usr/bin/perl -w
print "<div id=\"table\">
<table cellpadding =\"5\">
<tr><th>LIBRARY</th> <th>DATATYPES</th> <th>FUNCTIONS</th> <th>NOTES</th> </tr>
";
%ignorefiles = (
"index" => "indexfile",
"ajgraphxml" => "old graph XML code",
"pcre" => "PCRE library",
"pcre_study" => "PCRE library",
"pcre_chartables" => "PCRE library",
"pcre_printint" => "PCRE library",
"pcre_get" => "PCRE library",
"pcreposix" => "PCRE library",
);
%knownfiles = (
"ajacd" => "AJAX Command Definitions",
"ajalign" => "Alignments",
"ajarr" => "Array handling",
"ajassert" => "Assert function",
"ajbase" => "Base code functions",
"ajcall" => "Call registration functions",
"ajcod" => "Codon analysis functions",
"ajdan" => "DNA melting functions",
"ajdmx" => "Domainatrix package functions",
"ajdom" => "DOM parser for XML",
"ajdomain" => "Domain package functions",
"ajexcept" => "Exception handling",
"ajfeat" => "Feature table functions",
"ajfeatdata" => "Feature table data",
"ajfile" => "<i>File handling</i>",
"ajfmt" => "Formatted input and output",
"ajgraph" => "Graphical output",
"ajgraphstruct" => "Graphical output data structures",
"ajhist" => "Histogram graphical data",
"ajindex" => "Data indexing functions",
"ajjava" => "Java API functions",
"ajlist" => "Lists",
"ajmath" => "Maths utilities",
"ajmatrices" => "Comparison matrix functions",
"ajmem" => "Memory allocation",
"ajmess" => "Message handling",
"ajnam" => "Names: variables and database definitions",
"ajnexus" => "Nexus data format",
"ajpat" => "Pattern matching functions",
"ajpdb" => "Protein databank data format",
"ajpdbio" => "Protein databank I/O",
"ajphylo" => "Phylogenetic data functions",
"ajrange" => "Sequence range specifications",
"ajreg" => "Regular expressions",
"ajreport" => "Feature report output",
"ajseq" => "Sequence handling functions",
"ajseqabi" => "Sequence ABI traces",
"ajseqdata" => "Sequence data",
"ajseqdb" => "Sequence data access methods",
"ajseqread" => "Sequence input functions",
"ajseqtype" => "Sequence type checking",
"ajseqwrite" => "Sequence output functions",
"ajsort" => "Sort utility functions",
"ajstr" => "<i>String manipulation</i>",
"ajsys" => "System utilities",
"ajtable" => "Tables",
"ajtime" => "Time functions",
"ajtranslate" => "Sequence translation",
"ajtree" => "Phylogenetic trees",
"ajutil" => "Utilities",
"ajvector" => "Cloning vectors",
);
opendir(DIR, ".");
while ($file = readdir(DIR)) {
if($file =~ /^[.]/) {next}
if(-d $file) {next}
if($file =~ /[~]$/) {next}
if($file =~ /[.]inc$/) {next}
if($file =~ /^(.*)_static[.]html$/) {next}
elsif($file =~ /^(.*)[.]html$/) {
$fpref=$1;
if($ignorefiles{$fpref}) {next}
}
else {
print "+++ unknown file type $file\n";
next;
}
$empty=0;
open (HTML, "$file");
while (<HTML>) {
if (/No public datatype definitions in source file/) {$empty=1}
}
# print "$file ($fpref)\n";
close (HTML);
open (DD, "../datadef/$file");
$emptyd = 0;
while (<DD>) {
if(/No public datatype definitions in source file/) {$emptyd=1}
}
close (DD);
if(!defined($knownfiles{$fpref})) {
print STDERR "Unknown file: $fpref\n";
}
else {
$out = "\n<tr><td><b><i>$knownfiles{$fpref}</b></i></td>\n";
if(!$emptyd) {
$out .= "<td><a href=\"../datadef/$fpref.html\">Datatypes</a></td>\n";
}
else {
$out .= "<td> </td>\n";
}
if(!$empty) {
$out .= "<td><a href=\"$fpref.html\">Functions</a></td>\n";
}
else {
$out .= "<td> </td>\n";
}
$label = uc($fpref);
$label =~ s/^AJ//;
$out .= "<td><a href=\"#$label\">Notes</a></td></tr>\n";
$out{$fpref} = $out;
}
}
closedir(DIR);
foreach $x(keys(%knownfiles)) {
if(defined($out{$x})) {
print $out{$x};
}
else {
$fpref = $x;
open (DD, "../datadef/$fpref.html");
$emptyd = 0;
while (<DD>) {
if(/No public datatype definitions in source file/) {$emptyd=1}
}
close (DD);
$out = print "<tr><td><b><i>$knownfiles{$fpref}</b></i></td>\n";
if(!$emptyd) {
$out .= "<td><a href=\"../datadef/$fpref.html\">Datatypes</a></td>\n";
}
else {
$out .= "<td> </td>\n";
}
# we know there are no documented public functions!
$out .= "<td> </td>\n";
$label = uc($fpref);
$label =~ s/^AJ//;
$out .= "<td><a href=\"#$label\">Notes</a></td></tr>\n";
$out{$fpref} = $out;
print $out{$x};
}
}
print "</table>\n";
|
