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<HTML>
<HEAD>
<TITLE>
EMBOSS
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<table align=center border=0 cellspacing=0 cellpadding=0>
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<A HREF="/" ONMOUSEOVER="self.status='Go to the EMBOSS home page';return true"><img border=0 src="emboss_icon.jpg" alt="" width=150 height=48></a>
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<td align=left valign=middle>
<b><font size="+6">
NUCLEIC CODON USAGE
</font></b>
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</table>
<br>
<p>
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Codon usage analysis
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<tr><th>Program name</th><th>Description</th></tr>
<tr>
<td><a href="cai.html">cai</a></td>
<td>
Calculate codon adaptation index
</td>
</tr>
<tr>
<td><a href="chips.html">chips</a></td>
<td>
Calculate Nc codon usage statistic
</td>
</tr>
<tr>
<td><a href="codcmp.html">codcmp</a></td>
<td>
Codon usage table comparison
</td>
</tr>
<tr>
<td><a href="codcopy.html">codcopy</a></td>
<td>
Copy and reformat a codon usage table
</td>
</tr>
<tr>
<td><a href="cusp.html">cusp</a></td>
<td>
Create a codon usage table from nucleotide sequence(s)
</td>
</tr>
<tr>
<td><a href="syco.html">syco</a></td>
<td>
Draw synonymous codon usage statistic plot for a nucleotide sequence
</td>
</tr>
</table>
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</HTML>
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