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/* @source corba test for EBI EMBL database
**
** @author Copyright (C) Alan Bleasby (ableasby@hgmp.mrc.ac.uk)
** @@
**
** This program is free software; you can redistribute it and/or
** modify it under the terms of the GNU General Public License
** as published by the Free Software Foundation; either version 2
** of the License, or (at your option) any later version.
**
** This program is distributed in the hope that it will be useful,
** but WITHOUT ANY WARRANTY; without even the implied warranty of
** MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
** GNU General Public License for more details.
**
** You should have received a copy of the GNU General Public License
** along with this program; if not, write to the Free Software
** Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA.
******************************************************************************/
#include <stdio.h>
#include "emboss.h"
#ifndef HAVE_ORB_ORBIT_H
/* @header main ************************************************************
**
******************************************************************************/
int main(int argc, char **argv)
{
(void) argc;
(void) argv;
fprintf(stderr,"CORBA support has not been compiled\n");
return 0;
}
#else
/* @prog corbatest ************************************************************
**
** Testing
**
******************************************************************************/
int main(int argc, char **argv)
{
AjPFile outf = NULL;
AjPStr entry = NULL;
AjPCorbafeat feat = NULL;
AjPStr seq = NULL;
AjBool dofeat = ajTrue;
char *exerr = NULL;
ajint exint = 0;
ajint nfeat = 0;
ajint nlocs = 0;
ajint i;
ajint j;
ajint k;
ajint nval;
ajint ntags;
embInit("corbatest", argc, argv);
entry = ajAcdGetString("entry");
outf = ajAcdGetOutfile("outfile");
if(!(seq = ajSeqCorbaEmbl(ajStrGetPtr(entry),&exerr,&exint,&feat,dofeat)))
{
fprintf(stderr,"Error: %s\tCode: %d\n",exerr,exint);
return -1;
}
ajFmtPrintF(outf,"Sequence: %S\n",seq);
for(i=0;i<feat->Ntypes;++i)
{
ajFmtPrintF(outf,"Name: %S\tSource: %S\tID: %S\n",feat->Types[i]->Name,
feat->Types[i]->Source,feat->Types[i]->Id);
ajFmtPrintF(outf,"Start: %d\tEnd: %d\tStrand: %d\n",
feat->Types[i]->Start,feat->Types[i]->End,
feat->Types[i]->Strand);
ajFmtPrintF(outf,"Locations...\n");
nlocs = feat->Types[i]->Nlocs;
for(j=0;j<nlocs;++j)
{
ajFmtPrintF(outf,"Start: Pos=%d Ext=%d Fuzzy=%d\n",
feat->Types[i]->LSpos[j],
feat->Types[i]->LSex[j],
feat->Types[i]->LSfuzzy[j]);
ajFmtPrintF(outf,"End: Pos=%d Ext=%d Fuzzy=%d\n",
feat->Types[i]->LEpos[j],
feat->Types[i]->LEex[j],
feat->Types[i]->LEfuzzy[j]);
ajFmtPrintF(outf,"Strand: %d\n",feat->Types[i]->LStrand[j]);
}
ntags = feat->Types[i]->Ntags;
for(j=0;j<ntags;++j)
{
nval = feat->Types[i]->Nval[j];
for(k=0;k<nval;++k)
ajFmtPrintF(outf,"Tag: %S\tVal: %S\n",
feat->Types[i]->Tag[j],feat->Types[i]->Val[j][k]);
}
}
ajStrDel(&seq);
ajFileClose(&outf);
ajCorbafeatDel(&feat);
embExit();
return 0;
}
#endif
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