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Description: Fixes autopkgtest on other archs
There seems to be an issue with comparing a char and an int with the
value -1. Using an int to store the parameter of getopt fixes the
problems with the switch statement always hitting the default case.
Author: Mohammed Bilal <mdbilal@disroot.org>
Forwarded: not-needed
Last-Update: 2022-09-20
---
This patch header follows DEP-3: http://dep.debian.net/deps/dep3/
--- a/emmax-kin.c
+++ b/emmax-kin.c
@@ -61,7 +61,8 @@
int i, j, k, n, ac0, ac1, nmiss, nelems, nex, *nexes;
int verbose, ndigits, tped_nheadercols, tfam_nheadercols, flag_autosomal, rand_fill_flag, ibs_flag, gz_flag, hetero_division_flag;
unsigned char *snprow;
- char buf[SZBUF], c;
+ char buf[SZBUF];
+ int c;
double f, denom;
//long *fibs_sums, *scores, mean_score;
double *fibs_sums, *scores, mean_score;
--- a/emmax.c
+++ b/emmax.c
@@ -100,8 +100,8 @@
int main(int argc, char** argv) {
int i, j, k, l, n, nf, q0, ngrids, ndigits, istart, iend, nelems, nmiss, *wids;
- char *kinf, *phenof, *tpedf, *covf, *outf, *inf, *delims, *lbuf, c;
- int mphenoflag, write_eig_flag, gz_flag, tped_nheadercols, tfam_nheadercols, zero_miss_flag, isnpid, gen_kin_method, dosage_flag, gls_flag;
+ char *kinf, *phenof, *tpedf, *covf, *outf, *inf, *delims, *lbuf;
+ int mphenoflag, write_eig_flag, gz_flag, tped_nheadercols, tfam_nheadercols, zero_miss_flag, isnpid, gen_kin_method, dosage_flag, gls_flag, c;
double *phenos, *covs, *kins, *snps;
double sum, llim, ulim, stat, p;
clock_t cstart, cend, sum0, sum1, sum2, clapstart, clapend;
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