File: tddft_test.cc

package info (click to toggle)
ergo 3.5-1
  • links: PTS, VCS
  • area: main
  • in suites: buster, stretch
  • size: 17,044 kB
  • ctags: 6,813
  • sloc: cpp: 91,488; ansic: 15,728; sh: 6,416; makefile: 1,287; yacc: 123; lex: 108
file content (157 lines) | stat: -rw-r--r-- 4,916 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
/* Ergo, version 3.5, a program for linear scaling electronic structure
 * calculations.
 * Copyright (C) 2016 Elias Rudberg, Emanuel H. Rubensson, Pawel Salek,
 * and Anastasia Kruchinina.
 * 
 * This program is free software: you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation, either version 3 of the License, or
 * (at your option) any later version.
 * 
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU General Public License for more details.
 * 
 * You should have received a copy of the GNU General Public License
 * along with this program.  If not, see <http://www.gnu.org/licenses/>.
 * 
 * Primary academic reference:
 * Kohn−Sham Density Functional Theory Electronic Structure Calculations 
 * with Linearly Scaling Computational Time and Memory Usage,
 * Elias Rudberg, Emanuel H. Rubensson, and Pawel Salek,
 * J. Chem. Theory Comput. 7, 340 (2011),
 * <http://dx.doi.org/10.1021/ct100611z>
 * 
 * For further information about Ergo, see <http://www.ergoscf.org>.
 */

/** @file tddft_test.cc Tests the TDDFT interface.

It has to produce number of files for given molecule and basis set:

a. one electron integral matrix (T+V)
b. g_pqrs
c. V_pqrs^{xc}(rho0)

Example usage is:

 source/tddft/tddft_test mol/h2.mol STO-3G "Combine hf=0"


*/

#include <stdio.h>
#include <memory>

#include "Matrix.h"
#include "SCF_restricted.h"
#include "basisinfo.h"
#include "density_description_file.h"
#include "dft_common.h"
#include "integral_info.h"
#include "integrals_2el.h"
#include "matrix_utilities.h"
#include "memorymanag.h"
#include "molecule.h"
#include "scf.h"
#include "tddft.h"

static char usage[] =
  "Usage: tddft_test MOLFILE BASIS FUNCTIONAL\n"
  "\n"
  "Generates the relevant integrals for the TDDFT calculation.\n"
  "The data is saved in output.m containing data in octave format.\n";

int
main(int argc, char *argv[])
{
  if(argc<3) {
    fputs(usage, stderr);
    return 1;
  }

  Molecule molecule;
  Molecule extraCharges; /* Not used in this test. */

  if(molecule.setFromMoleculeFile(argv[1], 0, NULL)) {
    fprintf(stderr, "Reading molecule from %s failed.\n", argv[1]);
    return 1;
  }
  const char *basisFileName = argv[2];


  IntegralInfo integralInfo(true);
  BasisInfoStruct basisInfo;
  if(basisInfo.addBasisfuncsForMolecule(molecule, 
                                        basisFileName,
                                        0, NULL,
                                        integralInfo, 
                                        false,
                                        true, true) != 0) {
    fprintf(stderr, "Error in BasisInfoStruct::add_basisfuncs_for_molecule "
            "for main basis set, Basis='%s'",
            basisFileName);
    return -1;
  }

  SCF::Options scfOptions;  /* Defaults */
  scfOptions.use_dft  = strcmp(argv[3], "HF") != 0;
  if(scfOptions.use_dft) {
    if(dft_setfunc(argv[3]) == 0) {
      fprintf(stderr, "Error in functional definition '%s'.", argv[3]);
      return 1;
    }
  }

  try {
    static const ergo_real THRESHOLD_1EL    = 1e-12;
    JK::Params   jkOptions;   /* Defaults */
    SCF::MatOptions matOpts;  /* Defaults */
    matOpts.prepare(basisInfo);

    BasisInfoStruct basisInfoDensFit;
    Dft::GridParams gridParams;
  
    SCF_restricted scf(molecule,
		       extraCharges,
                       basisInfo, 
                       basisInfoDensFit,
                       integralInfo,
                       NULL,
                       jkOptions,
		       gridParams,
                       scfOptions,
                       matOpts,
                       THRESHOLD_1EL);
    scf.do_SCF_iterations();
    FILE *f = fopen("output.m", "wt");
    TDDFT::saveOverlap(basisInfo, f);
    TDDFT::saveDipole(basisInfo, f);
    TDDFT::saveKinetic(basisInfo, f);
    TDDFT::savePotential(molecule, basisInfo, integralInfo, f);
    TDDFT::saveCoulomb(basisInfo, integralInfo, f);
    {
      ergo_real       *densMatrix_full = NULL;
      BasisInfoStruct *basis_read  = NULL;
      if(ddf_load_density("density.bin", 1, integralInfo,
			  &basis_read, &densMatrix_full) == 0) {
        TDDFT::saveXC(molecule, basisInfo, densMatrix_full, f);
	size_t n = basis_read->noOfBasisFuncs;
	TDDFT::writeMatlab(f, densMatrix_full, n, "density");
      } else
        fprintf(stderr, "ERROR: Density file disappeared?\n");
      ergo_free(densMatrix_full);
      delete basis_read;
    }
    fclose(f);
  } catch (const std::exception& e) {
    fprintf(stderr, "Exception caught: %s\n", e.what());
    return 1;
  } catch (const char* s) {
    fprintf(stderr, "Exception caught: %s\n", s);
    return 1;
  }
  puts("\nTD-DFT data generation completed.");
  return 0;
}