File: ni.phX.out

package info (click to toggle)
espresso 6.7-4
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 311,068 kB
  • sloc: f90: 447,429; ansic: 52,566; sh: 40,631; xml: 37,561; tcl: 20,077; lisp: 5,923; makefile: 4,503; python: 4,379; perl: 1,219; cpp: 761; fortran: 618; java: 568; awk: 128
file content (468 lines) | stat: -rw-r--r-- 18,308 bytes parent folder | download | duplicates (4)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468

     Program PHONON v.6.0 (svn rev. 13188M) starts on  7Dec2016 at 13:16:14 

     This program is part of the open-source Quantum ESPRESSO suite
     for quantum simulation of materials; please cite
         "P. Giannozzi et al., J. Phys.:Condens. Matter 21 395502 (2009);
          URL http://www.quantum-espresso.org", 
     in publications or presentations arising from this work. More details at
     http://www.quantum-espresso.org/quote

     Parallel version (MPI), running on     4 processors
     R & G space division:  proc/nbgrp/npool/nimage =       4

     Reading data from directory:
     /home/pietro/espresso-svn/tempdir/nickel.save

   Info: using nr1, nr2, nr3 values from input

   Info: using nr1, nr2, nr3 values from input

     IMPORTANT: XC functional enforced from input :
     Exchange-correlation      =  SLA  PW   PBE  PBE ( 1  4  3  4 0 0)
     Any further DFT definition will be discarded
     Please, verify this is what you really want

               file Ni.pbe-nd-rrkjus.UPF: wavefunction(s)  4S renormalized

     Parallelization info
     --------------------
     sticks:   dense  smooth     PW     G-vecs:    dense   smooth      PW
     Min         112      40     15                 1604      351      82
     Max         113      41     16                 1607      354      83
     Sum         451     163     61                 6423     1411     331


     Check: negative/imaginary core charge=   -0.000020    0.000000

     Calculation of q =    0.0000000   0.0000000   1.0000000

   Info: using nr1, nr2, nr3 values from input

   Info: using nr1, nr2, nr3 values from input

     Parallelization info
     --------------------
     sticks:   dense  smooth     PW     G-vecs:    dense   smooth      PW
     Min         112      40     21                 1604      351     132
     Max         113      41     22                 1607      354     135
     Sum         451     163     85                 6423     1411     531


     Title: 
     phonons of Ni at X                                                         


     bravais-lattice index     =            2
     lattice parameter (alat)  =       6.6500  a.u.
     unit-cell volume          =      73.5199 (a.u.)^3
     number of atoms/cell      =            1
     number of atomic types    =            1
     number of electrons       =        10.00
     number of Kohn-Sham states=           18
     kinetic-energy cutoff     =      27.0000  Ry
     charge density cutoff     =     300.0000  Ry
     Exchange-correlation      =  SLA  PW   PBE  PBE ( 1  4  3  4 0 0)
     Noncollinear calculation without spin-orbit


     celldm(1)=   6.650000  celldm(2)=   0.000000  celldm(3)=   0.000000
     celldm(4)=   0.000000  celldm(5)=   0.000000  celldm(6)=   0.000000

     crystal axes: (cart. coord. in units of alat)
               a(1) = (  -0.500000   0.000000   0.500000 )  
               a(2) = (   0.000000   0.500000   0.500000 )  
               a(3) = (  -0.500000   0.500000   0.000000 )  

     reciprocal axes: (cart. coord. in units 2 pi/alat)
               b(1) = ( -1.000000 -1.000000  1.000000 )  
               b(2) = (  1.000000  1.000000  1.000000 )  
               b(3) = ( -1.000000  1.000000 -1.000000 )  


     PseudoPot. # 1 for Ni read from file:
     ./Ni.pbe-nd-rrkjus.UPF
     MD5 check sum: 8081f0a005c9a5470caab1a58e82ecb2
     Pseudo is Ultrasoft + core correction, Zval = 10.0
     Generated by new atomic code, or converted to UPF format
     Using radial grid of 1203 points,  6 beta functions with: 
                l(1) =   0
                l(2) =   0
                l(3) =   1
                l(4) =   1
                l(5) =   2
                l(6) =   2
     Q(r) pseudized with 0 coefficients 


     atomic species   valence    mass     pseudopotential
        Ni            10.00    58.69340     Ni( 1.00)

     16 Sym. Ops., with inversion, found



   Cartesian axes

     site n.     atom                  positions (alat units)
         1           Ni  tau(   1) = (   0.0000000   0.0000000   0.0000000  )

     number of k points=   216  Marzari-Vanderbilt smearing, width (Ry)=  0.0200

     Number of k-points >= 100: set verbosity='high' to print them.

     Dense  grid:     6423 G-vectors     FFT dimensions: (  27,  27,  27)

     Smooth grid:     1411 G-vectors     FFT dimensions: (  15,  15,  15)

     Estimated max dynamical RAM per process >       1.61Mb

     Estimated total allocated dynamical RAM >       6.44Mb

     Check: negative/imaginary core charge=   -0.000020    0.000000

     The potential is recalculated from file :
     /home/pietro/espresso-svn/tempdir/_ph0/nickel.save/charge-density.dat

     Starting wfc are   12 atomic +    6 random wfc

     Band Structure Calculation
     Davidson diagonalization with overlap

     ethr =  1.00E-10,  avg # of iterations = 14.2

     total cpu time spent up to now is       18.4 secs

     End of band structure calculation

     Number of k-points >= 100: set verbosity='high' to print the bands.

     the Fermi energy is    14.2603 ev

     Writing output data file nickel.save

     Fixed quantization axis for GGA:    -0.000000    1.000000   -0.000000

     phonons of Ni at X                                                         

     bravais-lattice index     =            2
     lattice parameter (alat)  =       6.6500  a.u.
     unit-cell volume          =      73.5199 (a.u.)^3
     number of atoms/cell      =            1
     number of atomic types    =            1
     kinetic-energy cut-off    =      27.0000  Ry
     charge density cut-off    =     300.0000  Ry
     convergence threshold     =      1.0E-16
     beta                      =       0.7000
     number of iterations used =            4
     Exchange-correlation      =  SLA  PW   PBE  PBE ( 1  4  3  4 0 0)
     Noncollinear calculation without spin-orbit

     celldm(1)=    6.65000  celldm(2)=    0.00000  celldm(3)=    0.00000
     celldm(4)=    0.00000  celldm(5)=    0.00000  celldm(6)=    0.00000

     crystal axes: (cart. coord. in units of alat)
               a(1) = ( -0.5000  0.0000  0.5000 )  
               a(2) = (  0.0000  0.5000  0.5000 )  
               a(3) = ( -0.5000  0.5000  0.0000 )  

     reciprocal axes: (cart. coord. in units 2 pi/alat)
               b(1) = ( -1.0000 -1.0000  1.0000 )  
               b(2) = (  1.0000  1.0000  1.0000 )  
               b(3) = ( -1.0000  1.0000 -1.0000 )  


     Atoms inside the unit cell: 

     Cartesian axes

     site n.  atom      mass           positions (alat units)
        1     Ni  58.6934   tau(    1) = (    0.00000    0.00000    0.00000  )

     Computing dynamical matrix for 
                    q = (   0.0000000   0.0000000   1.0000000 )

      8 Sym.Ops. (no q -> -q+G )


     G cutoff =  336.0507  (   1607 G-vectors)     FFT grid: ( 27, 27, 27)
     G cutoff =  120.9783  (    354 G-vectors)  smooth grid: ( 15, 15, 15)

     number of k points=   216  Marzari-Vanderbilt smearing, width (Ry)=  0.0200

     PseudoPot. # 1 for Ni read from file:
     ./Ni.pbe-nd-rrkjus.UPF
     MD5 check sum: 8081f0a005c9a5470caab1a58e82ecb2
     Pseudo is Ultrasoft + core correction, Zval = 10.0
     Generated by new atomic code, or converted to UPF format
     Using radial grid of 1203 points,  6 beta functions with: 
                l(1) =   0
                l(2) =   0
                l(3) =   1
                l(4) =   1
                l(5) =   2
                l(6) =   2
     Q(r) pseudized with 0 coefficients 


     Mode symmetry, D_2h (mmm)  point group:


     Atomic displacements:
     There are   3 irreducible representations

     Representation     1      1 modes -B_1u  To be done

     Representation     2      1 modes -B_2u  To be done

     Representation     3      1 modes -B_3u  To be done



     Alpha used in Ewald sum =   2.8000
     PHONON       :    18.15s CPU        23.25s WALL



     Representation #  1 mode #   1

     Self-consistent Calculation

      iter #   1 total cpu time :    25.7 secs   av.it.:   4.9
      thresh= 1.000E-02 alpha_mix =  0.700 |ddv_scf|^2 =  5.476E-05

      iter #   2 total cpu time :    28.1 secs   av.it.:   7.7
      thresh= 7.400E-04 alpha_mix =  0.700 |ddv_scf|^2 =  3.185E-05

      iter #   3 total cpu time :    30.7 secs   av.it.:   7.2
      thresh= 5.643E-04 alpha_mix =  0.700 |ddv_scf|^2 =  4.082E-09

      iter #   4 total cpu time :    33.3 secs   av.it.:   7.3
      thresh= 6.389E-06 alpha_mix =  0.700 |ddv_scf|^2 =  3.666E-11

      iter #   5 total cpu time :    35.5 secs   av.it.:   6.6
      thresh= 6.055E-07 alpha_mix =  0.700 |ddv_scf|^2 =  1.176E-12

      iter #   6 total cpu time :    37.8 secs   av.it.:   7.1
      thresh= 1.085E-07 alpha_mix =  0.700 |ddv_scf|^2 =  5.548E-15

      iter #   7 total cpu time :    40.2 secs   av.it.:   7.3
      thresh= 7.448E-09 alpha_mix =  0.700 |ddv_scf|^2 =  7.637E-17

      iter #   8 total cpu time :    42.6 secs   av.it.:   7.2
      thresh= 8.739E-10 alpha_mix =  0.700 |ddv_scf|^2 =  1.260E-17

     End of self-consistent calculation

     Convergence has been achieved 


     Representation #  2 mode #   2

     Self-consistent Calculation

      iter #   1 total cpu time :    44.9 secs   av.it.:   4.3
      thresh= 1.000E-02 alpha_mix =  0.700 |ddv_scf|^2 =  6.625E-06

      iter #   2 total cpu time :    47.4 secs   av.it.:   7.9
      thresh= 2.574E-04 alpha_mix =  0.700 |ddv_scf|^2 =  2.584E-07

      iter #   3 total cpu time :    49.9 secs   av.it.:   7.7
      thresh= 5.083E-05 alpha_mix =  0.700 |ddv_scf|^2 =  1.503E-09

      iter #   4 total cpu time :    52.2 secs   av.it.:   7.1
      thresh= 3.877E-06 alpha_mix =  0.700 |ddv_scf|^2 =  2.603E-12

      iter #   5 total cpu time :    54.6 secs   av.it.:   7.2
      thresh= 1.613E-07 alpha_mix =  0.700 |ddv_scf|^2 =  5.865E-14

      iter #   6 total cpu time :    57.0 secs   av.it.:   7.4
      thresh= 2.422E-08 alpha_mix =  0.700 |ddv_scf|^2 =  2.505E-15

      iter #   7 total cpu time :    59.5 secs   av.it.:   8.0
      thresh= 5.005E-09 alpha_mix =  0.700 |ddv_scf|^2 =  5.891E-17

      iter #   8 total cpu time :    62.3 secs   av.it.:   7.9
      thresh= 7.676E-10 alpha_mix =  0.700 |ddv_scf|^2 =  2.594E-18

     End of self-consistent calculation

     Convergence has been achieved 


     Representation #  3 mode #   3

     Self-consistent Calculation

      iter #   1 total cpu time :    64.8 secs   av.it.:   4.3
      thresh= 1.000E-02 alpha_mix =  0.700 |ddv_scf|^2 =  6.625E-06

      iter #   2 total cpu time :    67.3 secs   av.it.:   7.9
      thresh= 2.574E-04 alpha_mix =  0.700 |ddv_scf|^2 =  2.584E-07

      iter #   3 total cpu time :    70.1 secs   av.it.:   7.7
      thresh= 5.083E-05 alpha_mix =  0.700 |ddv_scf|^2 =  1.503E-09

      iter #   4 total cpu time :    72.5 secs   av.it.:   7.1
      thresh= 3.877E-06 alpha_mix =  0.700 |ddv_scf|^2 =  2.603E-12

      iter #   5 total cpu time :    74.9 secs   av.it.:   7.2
      thresh= 1.613E-07 alpha_mix =  0.700 |ddv_scf|^2 =  5.865E-14

      iter #   6 total cpu time :    77.3 secs   av.it.:   7.4
      thresh= 2.422E-08 alpha_mix =  0.700 |ddv_scf|^2 =  2.506E-15

      iter #   7 total cpu time :    79.8 secs   av.it.:   8.0
      thresh= 5.006E-09 alpha_mix =  0.700 |ddv_scf|^2 =  5.893E-17

      iter #   8 total cpu time :    82.3 secs   av.it.:   7.9
      thresh= 7.677E-10 alpha_mix =  0.700 |ddv_scf|^2 =  2.679E-18

     End of self-consistent calculation

     Convergence has been achieved 

     Number of q in the star =    2
     List of q in the star:
          1   0.000000000   0.000000000   1.000000000
          2   1.000000000   0.000000000   0.000000000

     Diagonalizing the dynamical matrix

     q = (    0.000000000   0.000000000   1.000000000 ) 

 **************************************************************************
     freq (    1) =       6.382312 [THz] =     212.891027 [cm-1]
     freq (    2) =       6.382357 [THz] =     212.892523 [cm-1]
     freq (    3) =       8.906622 [THz] =     297.092916 [cm-1]
 **************************************************************************

     Mode symmetry, D_2h (mmm)  [C_2h (2/m) ] magnetic point group:

     freq (  1 -  1) =        212.9  [cm-1]   --> B_2u               
     freq (  2 -  2) =        212.9  [cm-1]   --> B_3u               
     freq (  3 -  3) =        297.1  [cm-1]   --> B_1u               

     init_run     :      0.24s CPU      0.35s WALL (       1 calls)
     electrons    :     14.23s CPU     18.03s WALL (       1 calls)

     Called by init_run:
     wfcinit      :      0.00s CPU      0.00s WALL (       1 calls)
     potinit      :      0.03s CPU      0.03s WALL (       1 calls)

     Called by electrons:
     c_bands      :     14.22s CPU     18.02s WALL (       1 calls)
     v_of_rho     :      0.04s CPU      0.05s WALL (       2 calls)
     newd         :      0.02s CPU      0.03s WALL (       2 calls)

     Called by c_bands:
     init_us_2    :      0.12s CPU      0.16s WALL (    3564 calls)
     cegterg      :     13.58s CPU     17.15s WALL (     223 calls)

     Called by sum_band:

     Called by *egterg:
     h_psi        :     26.25s CPU     35.84s WALL (   26146 calls)
     s_psi        :      3.88s CPU      4.71s WALL (   51384 calls)
     g_psi        :      0.02s CPU      0.03s WALL (    3061 calls)
     cdiaghg      :      6.18s CPU      7.42s WALL (    3277 calls)

     Called by h_psi:
     h_psi:pot    :     26.06s CPU     35.67s WALL (   26146 calls)
     h_psi:calbec :      2.20s CPU      3.06s WALL (   26146 calls)
     vloc_psi     :     21.81s CPU     29.98s WALL (   26146 calls)
     add_vuspsi   :      1.96s CPU      2.54s WALL (   26146 calls)

     General routines
     calbec       :      5.23s CPU      7.47s WALL (   57108 calls)
     fft          :      0.37s CPU      0.71s WALL (    1264 calls)
     ffts         :      0.01s CPU      0.03s WALL (     548 calls)
     fftw         :     19.91s CPU     28.91s WALL ( 1249472 calls)
     interpolate  :      0.06s CPU      0.07s WALL (     212 calls)
     davcio       :      0.18s CPU      0.31s WALL (   14046 calls)

     Parallel routines
     fft_scatter  :     10.70s CPU     18.24s WALL ( 1251284 calls)

     PHONON       :  1m 1.50s CPU     1m22.48s WALL

     INITIALIZATION: 
     phq_setup    :      0.10s CPU      0.12s WALL (       1 calls)
     phq_init     :      2.80s CPU      3.75s WALL (       1 calls)

     phq_init     :      2.80s CPU      3.75s WALL (       1 calls)
     set_drhoc    :      0.16s CPU      0.20s WALL (       3 calls)
     init_vloc    :      0.01s CPU      0.01s WALL (       2 calls)
     init_us_1    :      0.37s CPU      0.53s WALL (       2 calls)
     newd         :      0.02s CPU      0.03s WALL (       2 calls)
     dvanqq       :      0.11s CPU      0.16s WALL (       1 calls)
     drho         :      1.97s CPU      2.64s WALL (       1 calls)

     DYNAMICAL MATRIX:
     dynmat0      :      0.55s CPU      0.72s WALL (       1 calls)
     phqscf       :     43.34s CPU     59.22s WALL (       1 calls)
     dynmatrix    :      0.00s CPU      0.01s WALL (       1 calls)

     phqscf       :     43.34s CPU     59.22s WALL (       1 calls)
     solve_linter :     42.96s CPU     58.74s WALL (       3 calls)
     drhodv       :      0.38s CPU      0.47s WALL (       3 calls)

     dynmat0      :      0.55s CPU      0.72s WALL (       1 calls)
     dynmat_us    :      0.42s CPU      0.58s WALL (       1 calls)
     d2ionq       :      0.00s CPU      0.00s WALL (       1 calls)
     dynmatcc     :      0.12s CPU      0.14s WALL (       1 calls)

     dynmat_us    :      0.42s CPU      0.58s WALL (       1 calls)
     addusdynmat  :      0.00s CPU      0.00s WALL (       1 calls)

     phqscf       :     43.34s CPU     59.22s WALL (       1 calls)
     solve_linter :     42.96s CPU     58.74s WALL (       3 calls)

     solve_linter :     42.96s CPU     58.74s WALL (       3 calls)
     dvqpsi_us    :      1.36s CPU      1.68s WALL (     324 calls)
     ortho        :      1.49s CPU      2.26s WALL (    2592 calls)
     cgsolve      :     31.52s CPU     43.36s WALL (    2592 calls)
     incdrhoscf   :      3.14s CPU      4.07s WALL (    2592 calls)
     addusddens   :      0.58s CPU      0.66s WALL (      27 calls)
     vpsifft      :      1.85s CPU      2.83s WALL (    2268 calls)
     dv_of_drho   :      0.32s CPU      0.43s WALL (      24 calls)
     mix_pot      :      0.04s CPU      0.09s WALL (      24 calls)
     psymdvscf    :      0.31s CPU      0.36s WALL (      24 calls)
     newdq        :      0.46s CPU      0.55s WALL (      24 calls)
     adddvscf     :      0.54s CPU      0.70s WALL (    2268 calls)
     drhodvus     :      0.00s CPU      0.00s WALL (       3 calls)

     dvqpsi_us    :      1.36s CPU      1.68s WALL (     324 calls)
     dvqpsi_us_on :      1.02s CPU      1.07s WALL (     324 calls)

     cgsolve      :     31.52s CPU     43.36s WALL (    2592 calls)
     ch_psi       :     30.22s CPU     41.31s WALL (   22646 calls)

     ch_psi       :     30.22s CPU     41.31s WALL (   22646 calls)
     h_psi        :     26.25s CPU     35.84s WALL (   26146 calls)
     last         :      6.29s CPU      8.84s WALL (   22646 calls)

     h_psi        :     26.25s CPU     35.84s WALL (   26146 calls)
     add_vuspsi   :      1.96s CPU      2.54s WALL (   26146 calls)

     incdrhoscf   :      3.14s CPU      4.07s WALL (    2592 calls)

     drhodvus     :      0.00s CPU      0.00s WALL (       3 calls)

      General routines
     calbec       :      5.23s CPU      7.47s WALL (   57108 calls)
     fft          :      0.37s CPU      0.71s WALL (    1264 calls)
     ffts         :      0.01s CPU      0.03s WALL (     548 calls)
     fftw         :     19.91s CPU     28.91s WALL ( 1249472 calls)
     davcio       :      0.18s CPU      0.31s WALL (   14046 calls)
     write_rec    :      0.04s CPU      0.06s WALL (      27 calls)


     PHONON       :  1m 1.50s CPU     1m22.49s WALL


   This run was terminated on:  13:17:36   7Dec2016            

=------------------------------------------------------------------------------=
   JOB DONE.
=------------------------------------------------------------------------------=