File: run-unit-test

package info (click to toggle)
estscan 3.0.3-6
  • links: PTS, VCS
  • area: main
  • in suites: bookworm, forky, sid, trixie
  • size: 388 kB
  • sloc: ansic: 2,272; perl: 1,879; fortran: 130; makefile: 58; sh: 11
file content (18 lines) | stat: -rw-r--r-- 381 bytes parent folder | download 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
 
#!/bin/bash
set -e

pkg=estscan

export LC_ALL=C.UTF-8
if [ "${AUTOPKGTEST_TMP}" = "" ] ; then
  AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
  trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM
fi

cp -a /usr/share/doc/${pkg}/examples/* "${AUTOPKGTEST_TMP}"

cd "${AUTOPKGTEST_TMP}"


estscan -M Dr.smat sequence.fasta > output
[ -s "output" ] && echo 'PASS Test'