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#############################################################
## ##
## Copyright (c) 2003-2017 by The University of Queensland ##
## Centre for Geoscience Computing ##
## http://earth.uq.edu.au/centre-geoscience-computing ##
## ##
## Primary Business: Brisbane, Queensland, Australia ##
## Licensed under the Open Software License version 3.0 ##
## http://www.apache.org/licenses/LICENSE-2.0 ##
## ##
#############################################################
"""
Defines classes for parsing command line options of wave propagation
simulations.
"""
import optparse
import re
import copy
def getListFromString(opt, str, mapCallable):
"""
Parses a given string to extract a list. The expected format of the
string is '[e1,e2,e3,...]'. Returns C{map(mapCallable, [e1,e2,e3,...])}.
@type opt: string
@param opt: Command line option, only used for for creating
messages when raising OptionValueException
@type str: string
@param str: The option value string
@type mapCallable: callable
@param mapCallable: Callable object which converts a string
list element into another type, eg int, float, etc
@rtype: list
@return: list of converted-type elements.
"""
regex = re.compile("\[(.*)\]")
match = regex.match(str)
if (match != None):
try:
return list(map(mapCallable, str.split(match.group(1), ",")))
except ValueError:
raise \
optparse.OptionValueError(
(
"option {0!s}: Could not convert string elements of"+
" {1!r} to type."
).format(opt, str)
)
else:
raise \
optparse.OptionValueError(
"option {0!s}: invalid list value: {1!r}".format(opt, str)
)
def checkIntList(option, opt, value):
"""
Extracts a list of integers from a specified value.
@param option: The option.
@type opt: string
@param opt: The command line option string.
@type value: string
@param value: The value passed to the option.
@rtype list
@return: list of ints
"""
return getListFromString(opt, value, int)
def checkFloatList(option, opt, value):
"""
Extracts a list of floats from a specified value.
@type opt: string
@param opt: The command line option string.
@type value: string
@param value: The value passed to the option.
@rtype list
@return: list of floats
"""
return getListFromString(opt, value, float)
class ImprovedOption(optparse.Option):
"""
Extends optparse.Option class by adding 'int_list' and 'float_list' types
"""
TYPES = optparse.Option.TYPES + ("int_list", "float_list",)
TYPE_CHECKER = copy.copy(optparse.Option.TYPE_CHECKER)
TYPE_CHECKER["int_list"] = checkIntList
TYPE_CHECKER["float_list"] = checkFloatList
class OptionParser(optparse.OptionParser):
"""
Command line option parser for use in conjunction with
simple wave propagation simulations.
"""
def __init__(self, usage=None):
"""
Initialises this parser with options.
@type usage: string
@param usage: Usage string, if None, default value is given.
"""
if (usage==None):
usage =\
"usage: %prog [options]\n\n" +\
"Runs wave propagation simulation. A rectangular block of" +\
"\nparticles acts as the elastic medium. Two different spring" +\
"\nconstants can be specified to create non-homogeneity." +\
"\nA single point source disturbance creates a wave in the" +\
"elastic block."
optparse.OptionParser.__init__(
self,
usage=usage,
option_class=ImprovedOption
)
self.add_option(
"-n", "--mpi-worker-processes",
dest="numWorkerProcesses",
type="int",
metavar="N",
default=2,
help=\
"Defines the number of MPI worker processes " +\
"(default N=2)"
)
self.add_option(
"-d", "--mpi-dim-list",
dest="mpiDimList",
type="int_list",
metavar="D",
default=[2,0,0],
help=\
"Defines the spatial grid division of domain among "+\
" MPI worker processes (default D=[2,0,0])"
)
self.add_option(
"-t", "--time-step-size",
dest="timeStepSize",
type="float",
metavar="T",
default=0.05,
help=\
"Defines time step size used in explicit integration scheme "+\
"(default T=0.05)"
)
self.add_option(
"-r", "--radius",
dest="radius",
type="float",
metavar="R",
default=1.0,
help=\
"Defines radius of particles "+\
"(default R=1.0)"
)
self.add_option(
"-m", "--max-time-steps",
dest="maxNumTimeSteps",
type="int",
metavar="M",
default=2000,
help=\
"Defines max number of time step iterations "+\
"(default M=2000)"
)
self.add_option(
"-b", "--block-size",
dest="particlesPerDim",
type="int_list",
metavar="B",
default=[128,128,1],
help=\
"Defines the size of the particle block as number of " +\
"particles per dimension component "+\
"(default B=[128,128,1])"
)
self.add_option(
"-P", "--particle-data-incr",
dest="particleDataIncr",
type="int",
metavar="N",
default=100,
help=\
"Defines the frequency at which particle displacement data is " +\
"saved to file. Data is saved every N time steps "+\
"(default N=100)"
)
self.add_option(
"-S", "--seismo-data-incr",
dest="seismoDataIncr",
type="int",
metavar="N",
default=10,
help=\
"Defines the frequency at which seismograph data is " +\
"saved to file. Data is saved every N time steps "+\
"(default N=10)"
)
self.add_option(
"-v", "--verbosity",
dest="verbosity",
action="store_true",
default=False,
help=\
"Generates (lots of) debug output during simulation run" +\
" (default no debug output)"
)
self.add_option(
"-s", "--source-depth",
dest="sourceDepth",
type="float",
default=0.5,
metavar="D",
help=\
"Specifies the depth of the source disturbance as a value" +\
" between 0.0 and 1.0. A value of 0.0 places the source at" +\
" the surface of the particle-block, a value of 0.5 places the" +\
" source at the centre of the block, a value of 1.0 places" +\
" places the source at the bottom of the particle-block, etc"
" (default D=0.5). The source is centred in the particle block" +\
" with respect to the x and z dimensions."
)
self.add_option(
"-f", "--source-frequency",
dest="sourceFrequency",
type="float",
default=0.02,
metavar="F",
help=\
"Specifies the frequency of the sinusoidal source disturbance" +\
" (default F=0.02)"
)
self.add_option(
"-D", "--source-max-displacement",
dest="sourceMaxDisplacement",
type="float_list",
default=[0.1,0.1,0.0],
metavar="M",
help=\
"Specifies the maximum relative displacement point of" +\
" the source disturbance "+\
" (default F=[0.1,0.1,0.0]). If the point-source is located at" +\
" point X, then the source particle will be moved on the line" +\
" between the point X and the point X+F."
)
self.add_option(
"-U", "--upper-medum-depth",
dest="upperMediumDepth",
type="float",
metavar="D",
default=0.25,
help=\
"Specifies the depth of the --upper-spring-K bonds as a value" +\
" between 0.0 and 1.0. A 0.0 value implies no upper-spring-K" +\
" bonds, a 0.5 value creates half the bonds as upper-spring-K" +\
" and half the bonds as lower-spring-K, a 1.0 value "
" creates all bonds as upper-spring-K, etc" +\
" (default D=0.25)"
)
self.add_option(
"-u", "--upper-spring-K",
dest="upperSpringK",
type="float",
metavar="K",
default=1.0,
help=\
"Defines bond spring constant for 'upper' particle region"+\
" (default K=1.0)"
)
self.add_option(
"-l", "--lower-spring-K",
dest="lowerSpringK",
type="float",
metavar="K",
default=1.0,
help=\
"Defines bond spring constant for 'lower' particle region"+\
" (default K=1.0)"
)
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