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fasta3 36.3.8h.2020-02-11-3
  • links: PTS, VCS
  • area: main
  • in suites: bullseye
  • size: 6,048 kB
  • sloc: ansic: 56,138; perl: 10,192; python: 2,205; sh: 416; csh: 85; sql: 55; makefile: 38

Folder: scripts

d .. (parent)
- - rw-r--r-- 5,789 README
- - rw-r--r-- 3,182 README.scripts
- - rw-r--r-- 76 acc_examples
- - rwxr-xr-x 12,507 ann_exons_all.pl
- - rwxr-xr-x 7,198 ann_exons_ens.pl
- - rwxr-xr-x 4,691 ann_exons_ncbi.pl
- - rwxr-xr-x 8,501 ann_exons_up_sql.pl
- - rwxr-xr-x 12,193 ann_exons_up_sql_www.pl
- - rwxr-xr-x 9,074 ann_exons_up_www.pl
- - rwxr-xr-x 15,898 ann_feats2ipr.pl
- - rwxr-xr-x 15,966 ann_feats2ipr_e.pl
- - rwxr-xr-x 13,489 ann_feats_up_sql.pl
- - rwxr-xr-x 12,705 ann_feats_up_www2.pl
- - rwxr-xr-x 14,506 ann_ipr_www.pl
- - rwxr-xr-x 9,490 ann_pdb_cath.pl
- - rwxr-xr-x 8,375 ann_pdb_vast.pl
- - rwxr-xr-x 27,672 ann_pfam30_tmptbl.pl
- - rwxr-xr-x 27,255 ann_pfam_sql.pl
- - rwxr-xr-x 20,385 ann_pfam_www.pl
- - rw-r--r-- 265 ann_script_list
- - rwxr-xr-x 23,627 ann_upfeats_pfam_www_e.pl
- - rwxr-xr-x 44,866 annot_blast_btop2.pl
- - rwxr-xr-x 25,321 annot_blast_btop3.py
- - rwxr-xr-x 26,399 annot_blast_btop4.py
- - rwxr-xr-x 1,763 blastp_annot_cmd.sh
- - rwxr-xr-x 753 blastp_cmd.sh
- - rwxr-xr-x 4,583 color_defs.pl
- - rwxr-xr-x 4,564 exp_up_ensg.pl
- - rwxr-xr-x 3,275 expand_links.pl
- - rwxr-xr-x 5,572 expand_refseq_isoforms.pl
- - rwxr-xr-x 2,576 expand_uniref50.pl
- - rwxr-xr-x 6,043 expand_up_isoforms.pl
- - rwxr-xr-x 1,574 fasta_annot_cmd.sh
- - rwxr-xr-x 1,676 get_genome_seq.py
- - rwxr-xr-x 2,234 get_protein.py
- - rwxr-xr-x 1,497 get_protein_sql.py
- - rwxr-xr-x 4,000 get_protein_sql_www.py
- - rwxr-xr-x 878 get_refseq.py
- - rwxr-xr-x 441 get_uniprot.py
- - rwxr-xr-x 1,188 get_up_prot_iso_sql.py
- - rwxr-xr-x 8,976 lav2plt.pl
- - rwxr-xr-x 14,885 lavplt_ps.pl
- - rwxr-xr-x 13,069 lavplt_svg.pl
- - rwxr-xr-x 1,909 links2sql.pl
- - rwxr-xr-x 11,092 m8_btop_msa.pl
- - rwxr-xr-x 18,926 m9B_btop_msa.pl
- - rwxr-xr-x 16,976 map_exon_coords.py
- - rwxr-xr-x 7,659 merge_blast_btab.pl
- - rwxr-xr-x 9,415 merge_fasta_btab.pl
- - rwxr-xr-x 19,093 plot_domain2t.cgi
- - rwxr-xr-x 5,135 relabel_domains.py
- - rwxr-xr-x 30,354 rename_exons.py
- - rwxr-xr-x 3,042 summ_domain_ident.pl
- - rwxr-xr-x 690 test_ann_scripts.sh
- - rwxr-xr-x 2,786 test_py.sh