File: get_uniprot.py

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#!/usr/bin/python3

import sys
import re
import requests

ARGV = sys.argv[1:];

for acc_arg in ARGV :

## check for acc format
  if (re.search(r'\|',acc_arg)):
    acc_info=acc_arg.split('|')  # sp|P09488|GSTM1_HUMAN
    acc = acc_info[1]            # P09488
  else:
    acc = acc_arg

  url = "https://www.uniprot.org/uniprot/" + acc + ".fasta"
#  print url
  fa_req = requests.get(url)
  print(fa_req.text)