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#!/usr/bin/make -f
export DH_VERBOSE := 1
export PYBUILD_NAME=fastaq
export PYBUILD_TEST_PYTEST = 1
mandir := $(CURDIR)/debian/man
debfolder := $(CURDIR)/debian
%:
dh $@ --buildsystem=pybuild
override_dh_auto_build:
dh_python3
dh_auto_build
mkdir $(CURDIR)/doc
cd $(CURDIR)/doc
override_dh_auto_clean:
rm -rf build .pybuild doc pyfastaq.egg-info .pytest_cache
find . -name __pycache__ | xargs rm -rf
rm -rf $(mandir)
override_dh_installman:
mkdir -p $(mandir)
PYTHONPATH=. help2man -N -o debian/man/fastaq.1 \
-n 'FASTA and FASTQ file manipulation tools' \
--no-discard-stderr \
--version-string=`PYTHONPATH=. scripts/fastaq version` scripts/fastaq
sed -i 's/.SH DESCRIPTION/.SH DESCRIPTION\\n.nf/' debian/man/fastaq.1
scripts/fastaq 2>&1 | tail -n +13 | debian/make_man
dh_installman --
override_dh_auto_test:
PYBUILD_SYSTEM=custom \
PYBUILD_TEST_ARGS="cd {dir}; {interpreter} -m pytest pyfastaq/tests/" dh_auto_test
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