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// $Id: countTableComponent.cpp 9595 2011-06-30 18:56:40Z rubi $
// version 1.00
// last modified 3 Nov 2002
#include "countTableComponent.h"
#include "logFile.h"
void countTableComponentHom::zero() {
for (int alphabetChar1=0; alphabetChar1 < _countValues.size() ;++alphabetChar1) {
for (int alphabetChar2=0; alphabetChar2 < _countValues[alphabetChar1].size() ;++alphabetChar2) {
_countValues[alphabetChar1][alphabetChar2] = 0;
}
}
}
void countTableComponentHom::countTableComponentAllocatePlace(
const int alphabetSize) {
_countValues.resize(alphabetSize);
for (int alphabetChar=0; alphabetChar < alphabetSize;++alphabetChar) _countValues[alphabetChar].resize(alphabetSize);
}
void countTableComponentHom::printTable(ostream& out) const {
MDOUBLE sumCheck = 0.0;
for (int i=0; i < _countValues.size();++i) {
for (int k=0; k < _countValues.size();++k) {
out<<"counts["<<i<<"]["<<k<<"]"<<_countValues[i][k];
sumCheck += _countValues[i][k];
out<<endl;
}
}
out<<"sum is: "<<sumCheck<<endl;
}
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