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Source: fastqc
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Steffen Moeller <moeller@debian.org>,
Andreas Tille <tille@debian.org>,
Olivier Sallou <osallou@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper (>= 10),
javahelper,
default-jdk,
ant,
libhtsjdk-java,
libjbzip2-java,
libcommons-math3-java
Standards-Version: 3.9.8
Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/fastqc.git
Vcs-Git: https://anonscm.debian.org/git/debian-med/fastqc.git
Homepage: http://www.bioinformatics.babraham.ac.uk/projects/fastqc/
Package: fastqc
Architecture: all
Depends: ${misc:Depends},
${java:Depends},
libhtsjdk-java,
libjbzip2-java,
libcommons-math3-java,
default-jre | java7-runtime
Description: quality control for high throughput sequence data
FastQC aims to provide a simple way to do some quality control checks on
raw sequence data coming from high throughput sequencing pipelines. It
provides a modular set of analyses which you can use to give a quick
impression of whether your data has any problems of which you should
be aware before doing any further analysis.
.
The main functions of FastQC are
* Import of data from BAM, SAM or FastQ files (any variant)
* Providing a quick overview to tell you in which areas there may
be problems
* Summary graphs and tables to quickly assess your data
* Export of results to an HTML based permanent report
* Offline operation to allow automated generation of reports without
running the interactive application
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