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# (C) Copyright 2011- ECMWF.
#
# This software is licensed under the terms of the Apache Licence Version 2.0
# which can be obtained at http://www.apache.org/licenses/LICENSE-2.0.
# In applying this licence, ECMWF does not waive the privileges and immunities
# granted to it by virtue of its status as an intergovernmental organisation
# nor does it submit to any jurisdiction.
import logging
import pathlib
from typing import Generator
import datetime
import pytest
import itertools
import shutil
import yaml
import git
import eccodes as ec
import pyfdb
logger = logging.getLogger(__name__)
logger.addHandler(logging.NullHandler())
@pytest.fixture
def test_logger():
return logger
@pytest.fixture(scope="function")
def data_path() -> pathlib.Path:
"""
Provides path to test data
"""
path = pathlib.Path(__file__).resolve().parent / "data"
assert path.exists()
return path
@pytest.fixture(scope="function")
def test_data_path() -> pathlib.Path:
"""
Provides path to test data
"""
git_repo = git.Repo(__file__, search_parent_directories=True)
git_root = pathlib.Path(git_repo.git.rev_parse("--show-toplevel"))
path = git_root / "tests" / "pyfdb" / "data"
assert path.exists()
return path
@pytest.fixture(scope="session")
def session_tmp(tmp_path_factory) -> Generator[pathlib.Path, None, None]:
"""Temporary folder for use in a single session"""
tmp_dir = tmp_path_factory.mktemp("session_data")
yield tmp_dir
shutil.rmtree(str(tmp_dir))
@pytest.fixture(scope="function")
def function_tmp(tmp_path_factory) -> Generator[pathlib.Path, None, None]:
"""Temporary folder for use in a single function"""
tmp_function_dir = tmp_path_factory.mktemp("test_data", numbered=True)
yield tmp_function_dir
shutil.rmtree(str(tmp_function_dir))
@pytest.fixture(scope="function")
def build_grib_messages(data_path, session_tmp) -> pathlib.Path:
"""This fixture is setting up a certain set of GRIB files by using a template GRIB file.
For every triple of dates, times and parameters as stated below a new field is created
and written to a file. This file path is returned at the end of the method to be usable
in other fixtures.
"""
template_grib = data_path / "template.grib"
assert template_grib.is_file()
template_grib_fd = open(template_grib, "rb")
gid = ec.codes_grib_new_from_file(template_grib_fd)
template_grib_fd.close()
count_data_points = int(ec.codes_get(gid, "numberOfDataPoints"))
count_values = int(ec.codes_get(gid, "numberOfValues"))
count_missing = int(ec.codes_get(gid, "numberOfMissing"))
# This only supports messages without missing datapoints
assert count_data_points == count_values
assert count_missing == 0
# Set common keys / data "pattern"
ec.codes_set_string(gid, "type", "an")
ec.codes_set_string(gid, "class", "ea")
ec.codes_set_string(gid, "expver", "0001")
ec.codes_set_string(gid, "stream", "oper")
ec.codes_set_string(gid, "levtype", "sfc")
ec.codes_set_values(gid, list(range(0, count_values)))
dates = [20200101, 20200102, 20200103, 20200104]
times = [0, 300, 600, 900, 1200, 1500, 1800, 2100]
parameters = [167, 131, 132]
messages = session_tmp / "test_data.grib"
with open(messages, "wb") as out:
for date, time, parameter in itertools.product(dates, times, parameters):
ec.codes_set(gid, "date", date)
ec.codes_set(gid, "time", time)
ec.codes_set(gid, "paramId", parameter)
ec.codes_write(gid, out)
ec.codes_release(gid)
return messages
@pytest.fixture(scope="function", autouse=False)
def empty_fdb_setup(data_path, session_tmp, function_tmp) -> pathlib.Path:
"""
Creates a FDB setup in this tests temp directory.
This setup can be shared between tests
"""
schema_path_src = data_path / "schema"
assert schema_path_src.is_file()
schema_path = session_tmp / "schema"
shutil.copy(schema_path_src, schema_path)
db_store_path = session_tmp / function_tmp / "db_store"
db_store_path.mkdir()
fdb_config = dict(
type="local",
engine="toc",
schema=str(schema_path),
spaces=[
dict(
handler="Default",
roots=[
{"path": str(db_store_path)},
],
)
],
)
fdb_config_str = yaml.dump(fdb_config)
fdb_config_path = session_tmp / "fdb_config.yaml"
fdb_config_path.write_text(fdb_config_str)
return fdb_config_path
@pytest.fixture(scope="function", autouse=False)
def read_only_fdb_setup(empty_fdb_setup, build_grib_messages) -> pathlib.Path:
"""
Creates a FDB setup in this tests temp directory.
Test FDB currently reads all grib files in `tests/data`
This setup can be shared between tests as we will only read
data from this FDB
"""
logger.debug("***********READ ONLY FDB SETUP*******************")
with pyfdb.FDB(empty_fdb_setup) as fdb:
fdb.archive(build_grib_messages.read_bytes())
fdb.flush()
return empty_fdb_setup
@pytest.fixture(scope="function", autouse=False)
def read_write_fdb_setup(empty_fdb_setup, build_grib_messages) -> pathlib.Path:
"""
Creates a FDB setup in this tests temp directory.
This setup can be shared between tests as we will only read
data from this FDB
"""
with pyfdb.FDB(empty_fdb_setup) as fdb:
fdb.archive(build_grib_messages.read_bytes())
fdb.flush()
return empty_fdb_setup
@pytest.fixture(scope="function")
def build_grib_messages_relative_dates(data_path, session_tmp) -> pathlib.Path:
"""This fixture is setting up a certain set of GRIB files by using a template GRIB file.
For every triple of dates, times and parameters as stated below a new field is created
and written to a file. This file path is returned at the end of the method to be usable
in other fixtures.
Note:
This is the same as the build_grib_messages fixture but sets the dates to be relative
to today.
"""
template_grib = data_path / "template.grib"
assert template_grib.is_file()
template_grib_fd = open(template_grib, "rb")
gid = ec.codes_grib_new_from_file(template_grib_fd)
template_grib_fd.close()
count_data_points = int(ec.codes_get(gid, "numberOfDataPoints"))
count_values = int(ec.codes_get(gid, "numberOfValues"))
count_missing = int(ec.codes_get(gid, "numberOfMissing"))
# This only supports messages without missing datapoints
assert count_data_points == count_values
assert count_missing == 0
# Set common keys / data "pattern"
ec.codes_set_string(gid, "type", "an")
ec.codes_set_string(gid, "class", "ea")
ec.codes_set_string(gid, "expver", "0001")
ec.codes_set_string(gid, "stream", "oper")
ec.codes_set_string(gid, "levtype", "sfc")
ec.codes_set_values(gid, list(range(0, count_values)))
today_date = datetime.date.today()
today = int(today_date.strftime("%Y%m%d"))
yesterday = int((today_date - datetime.timedelta(days=1)).strftime("%Y%m%d"))
before_yesterday = int((today_date - datetime.timedelta(days=2)).strftime("%Y%m%d"))
before_before_yesterday = int((today_date - datetime.timedelta(days=3)).strftime("%Y%m%d"))
dates = [before_before_yesterday, before_yesterday, yesterday, today]
times = [0, 300, 600, 900, 1200, 1500, 1800, 2100]
parameters = [167, 131, 132]
messages = session_tmp / "test_data.grib"
with open(messages, "wb") as out:
for date, time, parameter in itertools.product(dates, times, parameters):
ec.codes_set(gid, "date", date)
ec.codes_set(gid, "time", time)
ec.codes_set(gid, "paramId", parameter)
ec.codes_write(gid, out)
ec.codes_release(gid)
return messages
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