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|
DPKG_EXPORT_BUILDFLAGS = 1
include /usr/share/dpkg/default.mk
include /usr/share/dpkg/architecture.mk
OS_ID := $(shell grep -E "^ID" /etc/os-release | sed "s/^ID=//")
DEB_SOURCE_PACKAGE := $(strip $(shell egrep '^Source: ' debian/control | cut -f 2 -d ':'))
DEB_VERSION := $(shell dpkg-parsechangelog | egrep '^Version:' | cut -f 2 -d ' ')
DEB_EPOCH := $(shell echo $(DEB_VERSION) | cut -d: -f1)
DEB_NOEPOCH_VERSION := $(shell echo $(DEB_VERSION) | cut -d: -f2-)
DEB_UPSTREAM_VERSION := $(shell echo $(DEB_NOEPOCH_VERSION) | sed 's/-[^-]*$$//')
DEB_STRIPPED_UPSTREAM_VERSION = $(shell echo $(DEB_UPSTREAM_VERSION) | sed -e 's/\+dfsg.*$$//p')
DEBIAN_VERSION_ID := $(OS_ID)_$(DEB_VERSION)
DOLFINX_RELEASE_VERSION=$(DEB_STRIPPED_UPSTREAM_VERSION)
DOLFINX_MAJOR_VERSION=$(shell echo $(DOLFINX_RELEASE_VERSION) | sed "s/^\([^.]*\)\..*$$/\1/")
DOLFINX_MINOR_VERSION=$(shell echo $(DOLFINX_RELEASE_VERSION) | sed "s/^\([^.]*\)\.\([^.]*\)\..*$$/\2/")
DOLFINX_VERSION=$(DOLFINX_MAJOR_VERSION).$(DOLFINX_MINOR_VERSION)
DOLFINX_NEXT_VERSION=$(DEB_EPOCH):$(DOLFINX_MAJOR_VERSION).$(shell echo $$(( $(DOLFINX_MINOR_VERSION) + 1 )) )
# dolfinx depends on the pybind11 version it was built against,
# if pybind11.h will be used in C++ code fragments in python scripts.
# But pybind11 follows semantic versioning, so should have backwards compatibility
# with minor and patch version updates.
# Extract pybind11 version from pybind11-dev
PYBIND11_DEB_VERSION=$(shell dpkg -s pybind11-dev | awk '/Version:/ {print $$2}')
# extract the current pybind11 version X.Y.Z (drop epoch and debian package version)
PYBIND11_UPSTREAM_VERSION=$(shell echo $(PYBIND11_DEB_VERSION) | sed "s/^.[^:]*://; s/-[^-]*$$//")
PYBIND11_X_VERSION=$(shell echo $(PYBIND11_UPSTREAM_VERSION) | sed "s/^\([^.]*\).*/\1/")
PYBIND11_X_Y_VERSION=$(shell echo $(PYBIND11_UPSTREAM_VERSION) | sed "s/^\(.*\)\.\([^.]*\)$$/\1/")
PYBIND11_VERSION=$(PYBIND11_X_Y_VERSION)
PYBIND11_NEXT_VERSION=$(shell echo $$(( $(PYBIND11_X_VERSION) + 1 )) )
XTENSOR_DEB_VERSION=$(shell dpkg -s libxtensor-dev | awk '/Version:/ {print $$2}')
XTENSOR_VERSION=$(shell echo $(XTENSOR_DEB_VERSION) | sed "s/^.[^:]*://; s/-[^-]*$$//")
XSIMD_DEB_VERSION=$(shell dpkg -s libxsimd-dev | awk '/Version:/ {print $$2}')
XSIMD_VERSION=$(shell echo $(XSIMD_DEB_VERSION) | sed "s/^.[^:]*://; s/-[^-]*$$//")
# Allow test programs that use OpenMPI to run
export OMPI_MCA_plm_rsh_agent=/bin/false
export OMPI_MCA_btl_base_warn_component_unused=0
include /usr/share/mpi-default-dev/debian_defaults
ENABLE_MPI=ON
ifeq ($(findstring $(DEB_BUILD_ARCH),$(OPENMPI_ARCHITECTURES)),)
MPIEXEC_PARAMS=
else
MPIEXEC_PARAMS=--oversubscribe
endif
DOLFINX_HOME = $(CURDIR)/$(DEB_SRCDIR)
USCAN_DESTDIR := $(CURDIR)
PY3VERS := $(shell py3versions --requested debian/control | tac -s' ')
PYVERS = $(PY3VERS)
BUILDDIR_REAL = $(CURDIR)/obj-$(DEB_HOST_GNU_TYPE)-real
BUILDDIR_COMPLEX = $(CURDIR)/obj-$(DEB_HOST_GNU_TYPE)-complex
NPROC := $(shell nproc)
PARALLEL = $(subst parallel=,,$(filter parallel=%,$(DEB_BUILD_OPTIONS)))
N_CPU = $(or $(PARALLEL),$(NPROC),1)
# MPI tests are set up to run on 3 processes. Spread them leanly over the available processors (don't have more than 2 tests using one processor).
# e.g. run 1 MPI test at a time over 1-3 processors, or 2 tests at a time over 4-6 processors, or 3 tests over 7-9 processors, etc.
N_MPI := 3
N_MPI_TESTS = $(shell echo $$(( ($(N_CPU)+$(N_MPI)-1)/$(N_MPI) )) )
ifeq (nocheck,$(findstring nocheck,$(DEB_BUILD_OPTIONS)))
RUNTEST=no
endif
# demo_poisson_mpi segfaults on 32-bit systems, see Bug#995599
ifeq (32,$(DEB_HOST_ARCH_BITS))
SKIP_TEST_LIST = demo_poisson_mpi_2 demo_poisson_mpi_3
endif
# some arches just aren't keeping up at all, and fail non-MPI tests
ARCH_SKIP_ALL_TESTS_LIST = mips64el hurd-i386 m68k sh4
# extract PETSc version from petsc-dev
PETSC_DEB_VERSION=$(shell dpkg -s petsc-dev | awk '/Version:/ {print $2}')
# extract the current PETSc version
PETSC_UPSTREAM_VERSION=$(shell pkg-config --modversion PETSc)
# "Major" version is the first number in the upstream version (major.minor.release)
PETSC_MAJOR_VERSION=$(shell echo $(PETSC_UPSTREAM_VERSION) | sed "s/^\([^.]*\)\..*$$/\1/")
# "Minor" version is the second number in the upstream version (major.minor.release)
PETSC_MINOR_VERSION=$(shell echo $(PETSC_UPSTREAM_VERSION) | sed "s/^\([^.]*\)\.\([^.]*\)\..*$$/\2/")
PETSC_VERSION=$(PETSC_MAJOR_VERSION).$(PETSC_MINOR_VERSION)
PETSC_VERSION_NEXT=$(shell echo $(PETSC_MAJOR_VERSION).$$(($(PETSC_MINOR_VERSION)+1)))
SLEPC_UPSTREAM_VERSION=$(shell pkg-config --modversion SLEPc)
# SLEPc version must match PETSc
SLEPC_VERSION=$(PETSC_VERSION)
SLEPC_VERSION_NEXT=$(PETSC_VERSION_NEXT)
PETSC_DIR_BASE=/usr/lib/petscdir/petsc$(PETSC_VERSION)/$(DEB_HOST_MULTIARCH)
SLEPC_DIR_BASE=/usr/lib/slepcdir/slepc$(SLEPC_VERSION)/$(DEB_HOST_MULTIARCH)
export PETSC_DIR_REAL=$(PETSC_DIR_BASE)-real
SLEPC_DIR_REAL=$(SLEPC_DIR_BASE)-real
export PETSC_DIR_COMPLEX=$(PETSC_DIR_BASE)-complex
SLEPC_DIR_COMPLEX=$(SLEPC_DIR_BASE)-complex
# libxsimd-dev is available on some arches such as i386, m68k,
# but no xsimd instructions are actually available which can cause problems,
# or xsimd support fails tests
# (see also xsimd support in basix and xtensor)
# So explicitly switch xsimd support off except for arches where it is known to work.
XSIMD_ARCH_LIST := amd64 arm64 kfreebsd
ifneq (,$(findstring $(space)$(DEB_HOST_ARCH)$(space), $(space)$(XSIMD_ARCH_LIST)$(space)))
XSIMD_CONFIG=-DXTENSOR_USE_XSIMD=ON
else
XSIMD_CONFIG=-DXTENSOR_USE_XSIMD=OFF
endif
DEB_CXXFLAGS := $(shell dpkg-buildflags --get CXXFLAGS)
ifeq ($(DEB_HOST_ARCH),mips64el)
DEB_CXXFLAGS += -Wno-error=maybe-uninitialized
endif
CMAKE_OPTS := \
-D CMAKE_BUILD_TYPE:STRING=RelWithDebInfo \
-D BUILD_SHARED_LIBS:BOOL=ON \
-D CMAKE_SKIP_RPATH:BOOL=ON \
-D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF \
-D DOLFINX_ENABLE_TRILINOS:BOOL=OFF \
-D DOLFINX_ENABLE_HDF5:BOOL=ON \
-D HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc \
-D DOLFINX_ENABLE_PARMETIS:BOOL=OFF \
-D DOLFINX_ENABLE_SCOTCH:BOOL=ON \
-D DOLFINX_ENABLE_DOCS:BOOL=OFF \
-D DOLFINX_ENABLE_MPI:BOOL=$(ENABLE_MPI) \
-D MPIEXEC_PARAMS:STRING="$(MPIEXEC_PARAMS)" \
-D CMAKE_CXX_FLAGS:STRING="-fpermissive" \
-D DOLFINX_EXTRA_CXX_FLAGS:STRING="$(DEB_CXXFLAGS)" \
-D DEBIAN_VERSION_ID=$(DEBIAN_VERSION_ID) \
$(XSIMD_CONFIG)
%:
dh $@ --buildsystem=cmake --with python3,sphinxdoc
override_dh_compress:
dh_compress -X.py -X.cpp -X.h -X.pdf -X.ufl
override_dh_auto_clean:
dh_auto_clean --builddir=$(BUILDDIR_REAL)
dh_auto_clean --builddir=$(BUILDDIR_COMPLEX)
rm -rf python/build-real python/build-complex
rm -rf debian/tmp-real debian/tmp-complex
rm -rf python/fenics_dolfinx.egg-info
rm -rf python/doc/build python/doc/source/generated
rm -rf cpp/doc/latex cpp/doc/html cpp/doc/xml
override_dh_auto_configure:
PETSC_DIR=$(PETSC_DIR_REAL) SLEPC_DIR=$(SLEPC_DIR_REAL) dh_auto_configure --builddir=$(BUILDDIR_REAL) -- $(CMAKE_OPTS) $(CURDIR)/cpp
PETSC_DIR=$(PETSC_DIR_COMPLEX) SLEPC_DIR=$(SLEPC_DIR_COMPLEX) dh_auto_configure --builddir=$(BUILDDIR_COMPLEX) -- $(CMAKE_OPTS) $(CURDIR)/cpp
override_dh_auto_build:
PETSC_DIR=$(PETSC_DIR_REAL) SLEPC_DIR=$(SLEPC_DIR_REAL) dh_auto_build --builddir=$(BUILDDIR_REAL)
PETSC_DIR=$(PETSC_DIR_COMPLEX) SLEPC_DIR=$(SLEPC_DIR_COMPLEX) dh_auto_build --builddir=$(BUILDDIR_COMPLEX)
override_dh_auto_test-arch:
echo "Tests must be run after installation"
override_dh_auto_test-indep:
override_dh_auto_install-real:
dh_auto_install --builddir=$(BUILDDIR_REAL) --destdir=debian/tmp-real
for build in real; do \
for v in $(PYVERS); do \
cd python; \
PATH=$(CURDIR)/debian/tmp-$${build}/usr/bin:$$PATH \
PETSC_DIR=$(PETSC_DIR_BASE)-$${build} SLEPC_DIR=$(SLEPC_DIR_BASE)-$${build} \
CXXFLAGS="$(DEB_CXXFLAGS) -isystem $(CURDIR)/debian/tmp-$${build}/usr/include" \
VERBOSE=1 \
$$v setup.py build --build-base=build-$${build} install --root=$(CURDIR)/debian/tmp-$${build} --install-layout=deb; \
cd ..; \
done; \
done
override_dh_auto_install-indep: override_dh_auto_install-real
dh_auto_install -i --builddir=$(BUILDDIR_COMPLEX) --destdir=debian/tmp-complex
(cd cpp/doc; doxygen)
(cd python/doc; \
mkdir -p build/pkgconfig; \
cp $(CURDIR)/debian/tmp-real/usr/lib/$(DEB_HOST_MULTIARCH)/pkgconfig/dolfinx_real.pc build/pkgconfig; \
sed "s|prefix=/usr|prefix=$(CURDIR)/debian/tmp-real/usr|" -i build/pkgconfig/dolfinx_real.pc; \
PYTHONPATH=$(CURDIR)/debian/tmp-real/usr/lib/python3/dist-packages \
PKG_CONFIG_PATH=`pwd`/build/pkgconfig:$${PKG_CONFIG_PATH} \
LD_LIBRARY_PATH=$(CURDIR)/debian/tmp-real/usr/lib/$(DEB_HOST_MULTIARCH)/:$${LD_LIBRARY_PATH} \
RDMAV_FORK_SAFE=1 \
make html)
dh_numpy3 -i
override_dh_auto_install-arch: override_dh_auto_install-real
dh_auto_install -a --builddir=$(BUILDDIR_COMPLEX) --destdir=debian/tmp-complex
dh_numpy3 -a
for build in complex; do \
for v in $(PYVERS); do \
cd python; \
PATH=$(CURDIR)/debian/tmp-$${build}/usr/bin:$$PATH \
PETSC_DIR=$(PETSC_DIR_BASE)-$${build} SLEPC_DIR=$(SLEPC_DIR_BASE)-$${build} \
CXXFLAGS="$(DEB_CXXFLAGS) -isystem $(CURDIR)/debian/tmp-$${build}/usr/include" \
VERBOSE=1 \
$$v setup.py build --build-base=build-$${build} install --root=$(CURDIR)/debian/tmp-$${build} --install-layout=deb; \
cd ..; \
done; \
done
chrpath -d $(CURDIR)/debian/tmp*/usr/lib/python*/dist-packages/dolfinx/*.so
sed -i "s/-D_FORTIFY_SOURCE=2//g" $(CURDIR)/debian/tmp*/usr/lib/$(DEB_BUILD_MULTIARCH)/pkgconfig/dolfinx*.pc
sed -i "s|-DNDEBUG||g" $(CURDIR)/debian/tmp*/usr/lib/$(DEB_BUILD_MULTIARCH)/pkgconfig/dolfinx*.pc
if [ "x$(RUNTEST)" != "xno" ]; then \
case " $(ARCH_SKIP_ALL_TESTS_LIST) " in \
*\ $(DEB_HOST_ARCH)\ *) echo "ALL tests have been disabled on $(DEB_HOST_ARCH)";; \
*) set -e; \
export CTEST_OUTPUT_ON_FAILURE=1; \
for build in real complex; do \
echo "== testing $$build number build =="; \
builddir=$(CURDIR)/obj-$(DEB_HOST_GNU_TYPE)-$${build}; \
for mytest in test demo; do \
echo "running tests from $$mytest for $$build build"; \
testdir=$${builddir}/$${mytest}; \
cd $$testdir; \
if [ "x$(SKIP_TEST_LIST)" != "x" ]; then echo "set(CTEST_CUSTOM_TESTS_IGNORE $(SKIP_TEST_LIST) )" >> CTestCustom.cmake; fi; \
PETSC_DIR=$(PETSC_DIR_BASE)-$${build} SLEPC_DIR=$(SLEPC_DIR_BASE)-$${build} cmake -DCMAKE_MODULE_PATH=$(CURDIR)/debian/tmp-$${build}/usr/lib/$(DEB_BUILD_MULTIARCH)/cmake/dolfinx \
-DDOLFINX_DIR=$(CURDIR)/debian/tmp-$${build}/usr/lib/$(DEB_BUILD_MULTIARCH)/cmake/dolfinx \
-DMPIEXEC_PARAMS:STRING="$(MPIEXEC_PARAMS)" \
$${testdir} ; \
make all VERBOSE=1; \
OMPI_ALLOW_RUN_AS_ROOT=1 OMPI_ALLOW_RUN_AS_ROOT_CONFIRM=1 make test VERBOSE=1; \
done; \
cd $(CURDIR); \
done; \
esac; \
fi
override_dh_install-arch:
dh_install -a
sed "s/set(CMAKE_IMPORT_FILE_VERSION 1)/set(CMAKE_IMPORT_FILE_VERSION 1)\n\nif(PETSC_SCALAR_COMPLEX)\n set(LIB_NAME_EXT \"_complex\")\nelse()\n set(LIB_NAME_EXT \"_real\")\nendif()/; \
s/libdolfinx_real.so/libdolfinx\$${LIB_NAME_EXT}.so/g" \
-i debian/libdolfinx-dev/usr/lib/$(DEB_HOST_MULTIARCH)/cmake/dolfinx/DOLFINXTargets-relwithdebinfo.cmake
override_dh_python3-arch:
dh_python3 -a
dh_numpy3 -a
mkdir -p debian/python3-dolfinx-real/$(PETSC_DIR_REAL)/lib
mv debian/python3-dolfinx-real/usr/lib/python3 debian/python3-dolfinx-real/$(PETSC_DIR_REAL)/lib
rm -rf debian/python3-dolfinx-real/$(PETSC_DIR_REAL)/lib/python3/dist-packages/dolfinx_utils
mkdir -p debian/python3-dolfinx-complex/$(PETSC_DIR_COMPLEX)/lib
mv debian/python3-dolfinx-complex/usr/lib/python3 debian/python3-dolfinx-complex/$(PETSC_DIR_COMPLEX)/lib
rm -rf debian/python3-dolfinx-complex/$(PETSC_DIR_COMPLEX)/lib/python3/dist-packages/dolfinx_utils
PETSC_DEV_DEPENDS="libpetsc-real$(PETSC_VERSION)-dev, libslepc-real$(SLEPC_VERSION)-dev"
PETSC_COMPLEX_DEV_DEPENDS="libpetsc-complex$(PETSC_VERSION)-dev, libslepc-complex$(SLEPC_VERSION)-dev"
PETSC4PY_DEPENDS_PY3=python3-petsc4py, python3-slepc4py, python3-petsc4py-real (>= $(PETSC_VERSION)), python3-petsc4py-real (<< $(PETSC_VERSION_NEXT)), python3-slepc4py-real (>= $(SLEPC_VERSION)), python3-slepc4py-real (<< $(SLEPC_VERSION_NEXT))
PETSC4PY_COMPLEX_DEPENDS_PY3=python3-petsc4py, python3-slepc4py, python3-petsc4py-complex (>= $(PETSC_VERSION)), python3-petsc4py-complex (<< $(PETSC_VERSION_NEXT)), python3-slepc4py-complex (>= $(SLEPC_VERSION)), python3-slepc4py-complex (<< $(SLEPC_VERSION_NEXT))
override_dh_gencontrol:
echo "python3-petsc4py-real:Depends=$(PETSC4PY_DEPENDS_PY3)" >> debian/python3-dolfinx-real.substvars
echo "python3-petsc4py-complex:Depends=$(PETSC4PY_COMPLEX_DEPENDS_PY3)" >> debian/python3-dolfinx-complex.substvars
echo "python-petsc4py-alt:Depends=$(PETSC4PY_DEPENDS_PY3)" >> debian/libdolfinx-dev.substvars
dh_gencontrol -- -Vpetsc:Depends=$(PETSC_DEV_DEPENDS) -Vpetsc-complex:Depends=$(PETSC_COMPLEX_DEV_DEPENDS) -Vdolfinx:Next-Upstream-Version=$(DOLFINX_NEXT_VERSION)~ \
-Vpybind11:Upstream-Version=$(PYBIND11_VERSION) -Vpybind11:Next-Upstream-Version=$(PYBIND11_NEXT_VERSION) \
-Vxtensor:Upstream-Version=$(XTENSOR_VERSION) -Vxsimd:Upstream-Version=$(XSIMD_VERSION)
override_dh_strip:
dh_strip --package=libdolfinx-real$(DOLFINX_VERSION) -Xcomplex -Xpython
dh_strip --package=libdolfinx-complex$(DOLFINX_VERSION) -Xreal -Xpython
dh_strip --package=python3-dolfinx-real
override_dh_dwz:
dh_dwz -Xcpp.cpython
override_dh_shlibdeps:
dh_shlibdeps --dpkg-shlibdeps-params=--ignore-missing-info
.PHONY: get-orig-source override_dh_strip
get-orig-source:
uscan --force-download --verbose --destdir $(USCAN_DESTDIR)
|
