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"""This script compiles and verifies the output for all form files
found in the 'demo' directory. The verification is performed in two
steps. First, the generated code is compared with stored references.
Then, the output from all functions in the generated code is compared
with stored reference values.
This script can also be used for benchmarking tabulate_tensor for all
form files found in the 'bench' directory. To run benchmarks, use the
option --bench.
"""
# Copyright (C) 2010 Anders Logg, Kristian B. Oelgaard and Marie E. Rognes
#
# This file is part of FFC.
#
# FFC is free software: you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# FFC is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with FFC. If not, see <http://www.gnu.org/licenses/>.
#
# First added: 2010-01-21
# Last changed: 2011-11-28
# FIXME: Need to add many more test cases. Quite a few DOLFIN forms
# failed after the FFC tests passed.
import os, sys, shutil, difflib
from numpy import array, shape, abs, max, isnan
from ffc.log import begin, end, info, info_red, info_green, info_blue
from ufctest import generate_test_code
from instant.output import get_status_output
# Parameters
output_tolerance = 1.e-6
demo_directory = "../../../../demo"
bench_directory = "../../../../bench"
# Global log file
logfile = None
# Extended quadrature tests (optimisations)
ext_quad = [\
"-r quadrature -O -feliminate_zeros",
"-r quadrature -O -fsimplify_expressions",
"-r quadrature -O -fprecompute_ip_const",
"-r quadrature -O -fprecompute_basis_const",
"-r quadrature -O -fprecompute_ip_const -feliminate_zeros",
"-r quadrature -O -fprecompute_basis_const -feliminate_zeros",
]
def run_command(command):
"Run command and collect errors in log file."
(status, output) = get_status_output(command)
if status == 0:
return True
global logfile
if logfile is None:
logfile = open("../../error.log", "w")
logfile.write(output + "\n")
print output
return False
def log_error(message):
"Log error message."
global logfile
if logfile is None:
logfile = open("../../error.log", "w")
logfile.write(message + "\n")
def clean_output(output_directory):
"Clean out old output directory"
if os.path.isdir(output_directory):
shutil.rmtree(output_directory)
os.mkdir(output_directory)
def generate_test_cases(bench):
"Generate form files for all test cases."
begin("Generating test cases")
# Copy form files
if bench:
form_directory = bench_directory
else:
form_directory = demo_directory
form_files = [f for f in os.listdir(form_directory) if f.endswith(".ufl")]
form_files.sort()
for f in form_files:
shutil.copy("%s/%s" % (form_directory, f), ".")
info_green("Found %d form files" % len(form_files))
# Generate form files for forms
info("Generating form files for extra forms: Not implemented")
# Generate form files for elements
if not bench:
from elements import elements
info("Generating form files for extra elements (%d elements)" % len(elements))
for (i, element) in enumerate(elements):
open("X_Element%d.ufl" % i, "w").write("element = %s" % element)
end()
def generate_code(args):
"Generate code for all test cases."
# Get a list of all files
form_files = [f for f in os.listdir(".") if f.endswith(".ufl")]
form_files.sort()
begin("Generating code (%d form files found)" % len(form_files))
# Iterate over all files
for f in form_files:
cmd = ("ffc %s -f precision=8 -fconvert_exceptions_to_warnings %s"
% (" ".join(args), f))
# Generate code
ok = run_command(cmd)
# Check status
if ok:
info_green("%s OK" % f)
else:
info_red("%s failed" % f)
end()
def validate_code(reference_dir):
"Validate generated code against references."
# Get a list of all files
header_files = [f for f in os.listdir(".") if f.endswith(".h")]
header_files.sort()
begin("Validating generated code (%d header files found)" % len(header_files))
# Iterate over all files
for f in header_files:
# Get generated code
generated_code = open(f).read()
# Get reference code
reference_file = os.path.join(reference_dir, f)
if os.path.isfile(reference_file):
reference_code = open(reference_file).read()
else:
info_blue("Missing reference for %s" % reference_file)
continue
# Compare with reference
if generated_code == reference_code:
info_green("%s OK" % f)
else:
info_red("%s differs" % f)
diff = "\n".join([line for line in difflib.unified_diff(reference_code.split("\n"), generated_code.split("\n"))])
s = ("Code differs for %s, diff follows"
% os.path.join(*reference_file.split(os.path.sep)[-3:]))
log_error("\n" + s + "\n" + len(s)*"-")
log_error(diff)
end()
def build_programs(bench):
"Build test programs for all test cases."
# Get a list of all files
header_files = [f for f in os.listdir(".") if f.endswith(".h")]
header_files.sort()
begin("Building test programs (%d header files found)" % len(header_files))
# Get UFC flags
ufc_cflags = get_status_output("pkg-config --cflags ufc-1")[1].strip()
# Get Boost dir (code copied from ufc/src/utils/python/ufc_utils/build.py)
# Set a default directory for the boost installation
if sys.platform == "darwin":
# Use MacPorts as default
default = os.path.join(os.path.sep, "opt", "local")
else:
default = os.path.join(os.path.sep, "usr")
# If BOOST_DIR is not set use default directory
boost_inc_dir = ""
boost_lib_dir = ""
boost_dir = os.getenv("BOOST_DIR", default)
boost_is_found = False
for inc_dir in ["", "include"]:
if os.path.isfile(os.path.join(boost_dir, inc_dir, "boost", "version.hpp")):
boost_inc_dir = os.path.join(boost_dir, inc_dir)
break
for lib_dir in ["", "lib"]:
if os.path.isfile(os.path.join(boost_dir, lib_dir, "libboost_math_tr1.so")) or\
os.path.isfile(os.path.join(boost_dir, lib_dir, "libboost_math_tr1.dylib")):
boost_lib_dir = os.path.join(boost_dir, lib_dir)
break
if boost_inc_dir != "" and boost_lib_dir != "":
boost_is_found = True
if not boost_is_found:
raise OSError, """The Boost library was not found.
If Boost is installed in a nonstandard location,
set the environment variable BOOST_DIR.
"""
ufc_cflags += " -I%s -L%s" % (boost_inc_dir, boost_lib_dir)
# Set compiler options
if bench > 0:
info("Benchmarking activated")
# Takes too long to build with -O2
#compiler_options = "%s -Wall -Werror -O2" % ufc_cflags
compiler_options = "%s -Wall -Werror" % ufc_cflags
else:
compiler_options = "%s -Wall -Werror -g" % ufc_cflags
info("Compiler options: %s" % compiler_options)
# Iterate over all files
for f in header_files:
# Generate test code
filename = generate_test_code(f, bench)
# Compile test code
prefix = f.split(".h")[0]
command = "g++ %s -o %s.bin %s.cpp -lboost_math_tr1" % (compiler_options, prefix, prefix)
ok = run_command(command)
# Check status
if ok:
info_green("%s OK" % prefix)
else:
info_red("%s failed" % prefix)
end()
def run_programs():
"Run generated programs."
# Get a list of all files
test_programs = [f for f in os.listdir(".") if f.endswith(".bin")]
test_programs.sort()
begin("Running generated programs (%d programs found)" % len(test_programs))
# Iterate over all files
for f in test_programs:
# Compile test code
prefix = f.split(".bin")[0]
try:
os.remove(prefix + ".out")
except:
pass
ok = run_command(".%s%s.bin > %s.out" % (os.path.sep, prefix, prefix))
# Check status
if ok:
info_green("%s OK" % f)
else:
info_red("%s failed" % f)
end()
def validate_programs(reference_dir):
"Validate generated programs against references."
# Get a list of all files
output_files = [f for f in os.listdir(".") if f.endswith(".out")]
output_files.sort()
begin("Validating generated programs (%d programs found)" % len(output_files))
# Iterate over all files
for f in output_files:
# Get generated output
generated_output = open(f).read()
# Get reference output
reference_file = os.path.join(reference_dir, f)
if os.path.isfile(reference_file):
reference_output = open(reference_file).read()
else:
info_blue("Missing reference for %s" % reference_file)
continue
# Compare with reference
ok = True
old = [line.split(" = ") for line in reference_output.split("\n") if " = " in line]
new = dict([line.split(" = ") for line in generated_output.split("\n") if " = " in line])
header = ("Output differs for %s, diff follows"
% os.path.join(*reference_file.split(os.path.sep)[-3:]))
for (key, value) in old:
# Check if value is present
if not key in new:
if ok: log_error("\n" + header + "\n" + len(header)*"-")
log_error("%s: missing value in generated code" % key)
ok = False
continue
# Extract float values
old_values = array([float(v) for v in value.split(" ")])
new_values = array([float(v) for v in new[key].split(" ")])
# Check that shape is correct
if not shape(old_values) == shape(new_values):
if ok: log_error("\n" + header + "\n" + len(header)*"-")
log_error("%s: shape mismatch" % key)
ok = False
continue
# Check that values match to within tolerance set by 'output_tolerance'
diff = max(abs(old_values - new_values))
if diff > output_tolerance or isnan(diff):
if ok: log_error("\n" + header + "\n" + len(header)*"-")
log_error("%s: values differ, error = %g (tolerance = %g)" % (key, diff, output_tolerance))
log_error(" old = " + " ".join("%.16g" % v for v in old_values))
log_error(" new = " + " ".join("%.16g" % v for v in new_values))
ok = False
# Add debugging output to log file
debug = "\n".join([line for line in generated_output.split("\n") if "debug" in line])
if debug: log_error(debug)
# Check status
if ok:
info_green("%s OK" % f)
else:
info_red("%s differs" % f)
end()
def main(args):
"Run all regression tests."
# Check command-line arguments
bench = "--bench" in args
fast = "--fast" in args
ext = "--ext_quad" in args
generate_only = "--generate-only" in args
args = [arg for arg in args
if not arg in ("--bench", "--fast", "--ext_quad",
"--generate-only")]
# Clean out old output directory
output_directory = "output"
clean_output(output_directory)
os.chdir(output_directory)
# Adjust which test cases (combinations of compile arguments) to
# run here
test_cases = ["-r auto"]
if (not bench and not fast):
test_cases += ["-r quadrature", "-r quadrature -O"]
if ext:
test_cases += ext_quad
for argument in test_cases:
begin("Running regression tests with %s" % argument)
# Clear and enter output sub-directory
sub_directory = "_".join(argument.split(" ")).replace("-", "")
clean_output(sub_directory)
os.chdir(sub_directory)
# Generate test cases
generate_test_cases(bench)
# Generate code
generate_code(args + [argument])
# Location of reference directories
reference_directory = os.path.abspath("../../references/")
code_reference_dir = os.path.join(reference_directory, sub_directory)
output_reference_dir = os.path.join(reference_directory, "output")
# Validate code by comparing to code generated with this set
# of compiler parameters
if not bench and argument not in ext_quad:
validate_code(code_reference_dir)
# Build and run programs and validate output to common
# reference
if fast or generate_only:
info("Skipping program validation")
elif bench:
build_programs(bench)
run_programs()
else:
build_programs(bench)
run_programs()
validate_programs(output_reference_dir)
# Go back up
os.chdir(os.path.pardir)
end()
# Print results
if logfile is None:
info_green("Regression tests OK")
return 0
else:
info_red("Regression tests failed")
info("Error messages stored in error.log")
return 1
if __name__ == "__main__":
sys.exit(main(sys.argv[1:]))
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