File: samples.cnv

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chrX -1 -1 NA12878 2  # means NA12878 has copy number 2 in all of chrX
chrX -1 -1 NA12879 1  # ... copy number 1
chrX -1 -1 NA13469 2
chrX -1 -1 NA21328 2
chrX -1 -1 NA12970 2
chrY -1 -1 NA12877 1
chrX -1 -1 NA12877 1
chr20 20000 30000 NA12877 1   # NA12877 has one copy of chr20:20000..30000
chr20 20000 30000 NA12879 3   # NA12879 has four copies of chr20:20000..30000