1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 588 589 590 591 592 593 594 595 596 597 598 599 600 601 602 603 604 605 606 607 608 609 610 611 612 613 614 615 616 617 618 619 620 621 622 623 624 625 626 627 628 629 630 631 632 633 634 635 636 637 638 639 640 641 642 643 644 645 646 647 648 649 650 651 652 653 654 655 656 657 658 659 660 661 662 663 664 665 666 667 668 669 670 671 672 673 674 675 676 677 678 679 680 681 682 683 684 685 686 687 688 689 690 691 692 693 694 695 696 697 698 699 700 701 702 703 704 705 706 707 708 709 710 711 712 713 714 715 716 717 718 719 720 721 722 723 724 725 726 727 728 729 730 731 732 733 734 735 736 737 738 739 740 741 742 743 744 745 746 747 748 749 750 751 752 753 754 755 756 757 758 759 760 761 762 763 764 765 766 767 768 769 770 771 772 773 774 775 776 777 778 779 780 781 782 783 784 785 786 787 788 789 790 791 792 793 794 795 796 797 798 799 800 801 802 803 804 805 806
|
/*
* Copyright (c) 1999-2003 Smithsonian Astrophysical Observatory
*/
#include <funtoolsP.h>
/*
*
* private routines
*
*/
/*
*
* _FunRawEvOpen -- open a raw events file,
* set up binning and filtering parameters
*
*/
#ifdef ANSI_FUNC
static Fun
_FunRawEvOpen(char *fname, char *tail, char *mode, char *eventdef)
#else
static Fun _FunRawEvOpen(fname, tail, mode, eventdef)
char *fname;
char *tail;
char *mode;
char *eventdef;
#endif
{
Fun fun;
char tbuf[SZ_LINE];
/* sanity check */
if( !eventdef || !*eventdef )
return NULL;
/* allocate a fun record */
if( !(fun = _FunNew()) ) return NULL;
/* see if this file name is a view */
FunView(fun, fname, mode, tbuf, SZ_LINE);
/* try to open the file */
if( !(fun->gio=gopen(tbuf, mode)) ) goto error;
/* save filename and mode */
fun->fname = xstrdup(tbuf);
fun->mode = xstrdup(mode);
/* create a fake table header from the event description */
if( !(fun->header = _FunRawEvHeader(fun, tbuf, tail, eventdef)) )
goto error;
/* its a valid event file */
fun->type = FUN_EVENTS;
/* no blanks for events */
fun->doblank = 0;
/* look for indication of whether these data are bigendian */
if( _FunKeyword(tail, "endian", "EVENTS_ENDIAN", tbuf, SZ_LINE) )
fun->endian = ((*tbuf == 'b') || (*tbuf == 'B'));
else if( _FunKeyword(tail, "bigendian", "EVENTS_BIGENDIAN", tbuf, SZ_LINE) )
fun->endian = istrue(tbuf);
/* otherwise assume we have native format */
else
fun->endian = is_bigendian();
/* look for indication of bitpix */
if( _FunKeyword(tail, "bitpix", "EVENTS_BITPIX", tbuf, SZ_LINE) )
fun->bitpix = atoi(tbuf);
/* else assume a safe value */
else
fun->bitpix = 32;
if( _FunKeyword(tail, "skip", "EVENTS_SKIP", tbuf, SZ_LINE) )
fun->skip = atoi(tbuf);
/* determine whether we are only processing specific rows */
_FunRowNum(fun, tail, NULL);
/* get the key for binning */
_FunTableBinCols(fun, tail, "EVENTS_BINCOLS");
/* get the key for the value column for binning */
_FunTableValCol(fun, tail, "EVENTS_VCOL");
/* calculate the image length including padding */
_FunImageSize(fun);
/* now parse the section specification */
_FunParseSection(fun, tail,
&(fun->x0), &(fun->x1), &(fun->y0), &(fun->y1),
&(fun->block), &(fun->btype), tail, SZ_LINE);
/* get maxbufsize for table access */
_FunMaxBufSize(fun, tail);
/* what's left in the tail is the filter */
fun->filter = xstrdup(tail);
/* fill in the default selected columns */
FunColumnSelect(fun, 0, "copy=reference", NULL);
/* skip events header, if necessary */
if( fun->skip )
gskip(fun->gio, (off_t)fun->skip);
/* common code */
if( !_FunOpenCommon(fun) ) goto error;
/* return completed struct */
return fun;
error:
_FunFree(fun, 1);
return NULL;
}
/*
*
* _FunArrayOpen -- open a raw array file,
* set up binning and filtering parameters
*
*/
#ifdef ANSI_FUNC
static Fun
_FunArrayOpen(char *fname, char *tail, char *mode, char *arraydef)
#else
static Fun _FunArrayOpen(fname, tail, mode, arraydef)
char *fname;
char *tail;
char *mode;
char *arraydef;
#endif
{
Fun fun;
char tbuf[SZ_LINE];
/* sanity check */
if( !arraydef || !*arraydef )
return NULL;
/* allocate a fun record */
if( !(fun = _FunNew()) ) return NULL;
/* see if this file name is a view */
FunView(fun, fname, mode, tbuf, SZ_LINE);
/* try to open the file */
if( !(fun->gio=gopen(tbuf, mode)) ) goto error;
/* save filename and mode */
fun->fname = xstrdup(tbuf);
fun->mode = xstrdup(mode);
/* look for indication of whether these data are bigendian */
if( _FunKeyword(tail, "endian", "ARRAY_ENDIAN", tbuf, SZ_LINE) )
fun->endian = ((*tbuf == 'b') || (*tbuf == 'B'));
else if( _FunKeyword(tail, "bigendian", "ARRAY_BIGENDIAN", tbuf, SZ_LINE) )
fun->endian = istrue(tbuf);
/* otherwise assume we have native format */
else
fun->endian = is_bigendian();
/* parse the array spec for dimension info */
if( ParseArraySpec(arraydef, &(fun->dim1), &(fun->dim2),
&(fun->bitpix), &(fun->skip), &(fun->endian)) ){
fun->min1 = 1;
fun->max1 = fun->dim1;
if( fun->dim2 ){
fun->dims = 2;
fun->min2 = 1;
fun->max2 = fun->dim2;
}
else{
fun->dims = 1;
fun->dim2 = 1;
fun->min2 = 1;
fun->max2 = 1;
}
}
else
goto error;
/* we have a valid array */
fun->type = FUN_ARRAY;
/* no blanks for arrays */
fun->doblank = 0;
/* make a dummy FITS header for this array */
fun->header = ft_headinit(NULL, 0);
ft_headsetl(fun->header, "SIMPLE", 0, 1, "Is FITS of standard type?", 1);
ft_headseti(fun->header, "BITPIX", 0, fun->bitpix, "bits/pixel", 1);
ft_headseti(fun->header, "NAXIS", 0, fun->dims, "number of axes", 1);
ft_headseti(fun->header, "NAXIS", 1, fun->dim1, "x axis dimension", 1);
if( fun->dims >= 2 )
ft_headseti(fun->header, "NAXIS", 2, fun->dim2, "y axis dimension", 1);
ft_syncdata(fun->header);
/* calculate the image length including padding */
_FunImageSize(fun);
/* now parse the section specification */
_FunParseSection(fun, tail,
&(fun->x0), &(fun->x1), &(fun->y0), &(fun->y1),
&(fun->block), &(fun->btype), tail, SZ_LINE);
/* get maxbufsize for table access */
_FunMaxBufSize(fun, tail);
/* what's left in the tail is the filter */
fun->filter = xstrdup(tail);
/* skip array header, if necessary */
if( fun->skip )
gskip(fun->gio, (off_t)fun->skip);
/* common code */
if( !_FunOpenCommon(fun) ) goto error;
/* return completed struct */
return fun;
error:
_FunFree(fun, 1);
return NULL;
}
/*
*
* _FunFITSOpen -- open a FITS-type file, scan to the appropriate extension,
* set up binning and filtering parameters
*
*/
#ifdef ANSI_FUNC
Fun
_FunFITSOpen(Fun ifun, char *fname, char *mode)
#else
Fun _FunFITSOpen(ifun, fname, mode)
Fun ifun;
char *fname;
char *mode;
#endif
{
char tbuf[SZ_LINE];
char tail[SZ_LINE];
char iline[SZ_LINE];
GIO ifd=NULL;
Fun fun;
/* initialize iline */
memset(iline, 0, SZ_LINE);
/* use old fun handle */
if( ifun ){
fun = ifun;
strncpy(tbuf, fname, SZ_LINE);
}
/* allocate a fun record */
else{
if( !(fun = _FunNew()) ) return NULL;
/* see if this file name is a view */
FunView(fun, fname, mode, tbuf, SZ_LINE);
/* save filename and mode */
fun->fname = xstrdup(tbuf);
fun->mode = xstrdup(mode);
}
/* set up a default ext name for searching table extensions */
if( getenv("FITS_EXTNAME") == NULL )
putenv("FITS_EXTNAME=EVENTS STDEVT");
/* try to open as FITS */
if(!(fun->gio=ft_fitsheadopenfd(tbuf, &(fun->header), tail, SZ_LINE, mode,
fun->gio, iline, &ifd))){
/* if its not FITS, try opening as ascii text */
if( ifd && ( !iline[0] || (iline[0] && isascii(iline[0]))) ){
if( !ifun ) _FunFree(fun, 1);
return FunTextOpen(tbuf, mode, iline, ifd);
}
else{
goto error;
}
}
/* if we are delaying the real file positioning, exit here */
if( !fun->header )
return(fun);
/* we have a valid header -- process its specific type */
if( fun->header ){
/* its a FITS image */
if( fun->header->image ){
/* its an image */
fun->type = FUN_IMAGE;
/* if its FITS, its big-endian */
fun->endian = 1;
/* get info about the image */
fun->dims = ft_naxes(fun->header);
fun->min1 = 1;
fun->max1 = ft_naxis(fun->header, 1);
fun->dim1 = tldim(fun->min1, fun->max1, fun->binsiz1, 0);
if( fun->dims == 1 ){
fun->min2 = 1;
fun->max2 = 1;
fun->dim2 = 1;
}
else{
fun->min2 = 1;
fun->max2 = ft_naxis(fun->header, 2);
fun->dim2 = tldim(fun->min2, fun->max2, fun->binsiz2, 0);
}
if( (fun->max1 <0) || (fun->max2 <0) )
return 0;
fun->bitpix = ft_bitpix(fun->header);
fun->dtype = fun->bitpix / FT_WORDLEN;
/* determine scaling and blank parameters */
fun->bscale = ft_bscale(fun->header);
fun->bzero = ft_bzero(fun->header);
if( (ft_hasbscale(fun->header) && (fun->bscale != 1.0)) ||
(ft_hasbzero(fun->header) && (fun->bzero != 0.0)) )
fun->scaled = FUN_SCALE_EXISTS;
fun->doblank = ft_hasblank(fun->header);
fun->blank = ft_blank(fun->header);
/* if more than 2 axes, we might have to skip to an image plane ...
we assume that the first 2 dimensions are the image */
if( ft_naxes(fun->header) > 2 ){
if( (fun->skip = _FunImageSkip(fun, tail)) <0 )
return 0;
/* skip, if necessary */
if( fun->skip )
gskip(fun->gio, (off_t)fun->skip);
}
/* calculate the image length including padding */
_FunImageSize(fun);
/* now parse the section specification */
_FunParseSection(fun, tail,
&(fun->x0), &(fun->x1), &(fun->y0), &(fun->y1),
&(fun->block), &(fun->btype), tail, SZ_LINE);
/* get maxbufsize for table access */
_FunMaxBufSize(fun, tail);
/* what's left in the tail is the filter */
fun->filter = xstrdup(tail);
/* common code */
if( !_FunOpenCommon(fun) ) goto error;
/* return completed struct */
return fun;
}
/* its a FITS binary table */
else if( fun->header->table ){
/* start positive */
fun->type = FUN_TABLE;
/* if its FITS, its big-endian */
fun->endian = 1;
/* no blanks for tables */
fun->doblank = 0;
/* get size of record and number of records */
if( fun->header->basic ){
fun->rawsize = fun->header->basic->naxis[0];
fun->total = fun->header->basic->naxis[1];
fun->left = fun->total;
}
/* look for indication of bitpix */
if( _FunKeyword(tail, "bitpix", "FITS_BITPIX", tbuf, SZ_LINE) )
fun->bitpix = atoi(tbuf);
/* else assume a safe value */
else
fun->bitpix = 32;
/* should we use indices if we find them? */
if( _FunKeyword(tail, "idx_activate", "FILTER_IDX_ACTIVATE", tbuf, SZ_LINE) ){
if( istrue(tbuf) )
fun->idx = 1;
else if( isfalse(tbuf) )
fun->idx = -1;
}
/* else assume yes */
else
fun->idx = 1;
if( _FunKeyword(tail, "idx_debug", "FILTER_IDX_DEBUG", tbuf, SZ_LINE) ){
if( istrue(tbuf) )
idxdebug(1);
else if( isfalse(tbuf) )
idxdebug(0);
}
/* determine whether we are only processing specific rows */
_FunRowNum(fun, tail, NULL);
/* get the key for binning */
_FunTableBinCols(fun, tail, "FITS_BINCOLS");
/* get the key for the value column for binning */
_FunTableValCol(fun, tail, "FITS_VCOL");
/* calculate the image length including padding */
_FunImageSize(fun);
/* now parse the section specification */
_FunParseSection(fun, tail,
&(fun->x0), &(fun->x1), &(fun->y0), &(fun->y1),
&(fun->block), &(fun->btype), tail, SZ_LINE);
/* get maxbufsize for table access */
_FunMaxBufSize(fun, tail);
/* what's left in the tail is the filter */
fun->filter = xstrdup(tail);
/* fill in the default selected columns */
FunColumnSelect(fun, 0, "copy=reference", NULL);
/* common code */
if( !_FunOpenCommon(fun) ) goto error;
/* return completed struct */
return fun;
}
else
goto error;
}
else
goto error;
error:
if( !ifun ) _FunFree(fun, 1);
return NULL;
}
#ifdef ANSI_FUNC
static Fun
_FunOpen(char *fname, char *name, char *tail, int len, char *mode)
#else
static Fun
_FunOpen(fname, name, tail, len, mode)
char *fname;
char *name;
char *tail;
int len;
char *mode;
#endif
{
Fun fun=NULL;
char *special=NULL;
char *xname=NULL;
/* string to hold special characteristics must be len length */
if( !(special = xcalloc(len, sizeof(char))) ) return NULL;
/* remove quotes, if nexessary */
if( (*fname == '\'') || (*fname == '"') ){
xname = xstrdup(fname+1);
if( xname[strlen(xname)-1] == *fname ){
xname[strlen(xname)-1] = '\0';
}
}
else{
xname = xstrdup(fname);
}
if( _FunSpecialFile(xname, "ARRAY", name, tail, special, len) )
fun = _FunArrayOpen(name, tail, mode, special);
/* look for non-FITS events file */
else if( _FunSpecialFile(xname, "EVENTS", name, tail, special, len) )
fun = _FunRawEvOpen(name, tail, mode, special);
/* just a normal FITS file */
else
fun = _FunFITSOpen(NULL, xname, mode);
/* hack */
if( fun ){
/* here is the bad bit: we will want to select on the input file fd, but
gio "files" do not always have an fd and when they do, they might
have two of them. I am hacking this for the time being */
if( (fun->gio->type == GIO_DISK) || (fun->gio->type == GIO_STREAM) )
fun->ifd = fileno(fun->gio->fp);
else if((fun->gio->type == GIO_SOCKET)||(fun->gio->type == GIO_PIPE))
fun->ifd = fun->gio->ifd;
else
fun->ifd = -1;
}
/* clean up */
if( xname ) xfree(xname);
if( special ) xfree(special);
return fun;
}
/*
*
* public routines
*
*/
/*
*
* FunOpen -- open a FITS-type file, scan to the appropriate extension,
* set up binning and filtering parameters
*
*/
#ifdef ANSI_FUNC
Fun
FunOpen(char *fname, char *mode, Fun ref)
#else
Fun FunOpen(fname, mode, ref)
char *fname;
char *mode;
Fun ref;
#endif
{
int i;
int ltype;
int lmem;
int ip=0;
int got=0;
char name[SZ_LINE];
char tail[SZ_LINE];
char tbuf[SZ_LINE];
char tbuf2[SZ_LINE];
Fun tfun, fun=NULL;
Fun cur, last=NULL;
/* better have a filename and a mode */
if( !fname || !*fname || !mode || !*mode )
goto error;
/* handle non-read opens specially -- we have to create a file */
if( !strchr(mode, 'r') ){
/* allocate a fun record */
if( !(fun = _FunNew()) )
goto error;
/* for 'A' (mimick of append), we open r+ and seek to end */
if( strchr(mode, 'A') ){
if( !(fun->gio=gopen(fname, "r+")) )
goto error;
gseek(fun->gio, 0, SEEK_END);
}
/* normal open */
else{
if( !(fun->gio=gopen(fname, mode)) )
goto error;
}
/* save filename and mode */
fun->fname = xstrdup(fname);
fun->mode = xstrdup(mode);
/* make a primary header */
fun->primary = ft_headinit(NULL, 0);
/* make a header for temp variables */
fun->theader = ft_headinit(NULL, 0);
/* if a ref struct was specified, make a ref from the fun struct */
if( ref && (*(short *)ref == FUN_MAGIC) ){
fun->ifun = ref;
/* if we have delayed opening the reference for a copy, do it now */
if( !fun->ifun->header ){
/* set copy flag */
fun->icopy = 1;
/* set internal fitsy output channel */
ft_cfile(fun->gio);
/* open the file Now unless delay is requested */
if( !strchr(mode, 'd') ){
_FunFITSOpen(fun->ifun, fun->ifun->fname, "r");
/* reset output channel */
ft_cfile(NULL);
}
}
/* enter this handle in the backlink list of the reference file */
for(i=0; i<FUN_MAXBFUN; i++){
if( !fun->ifun->bfun[i] ){
fun->ifun->bfun[i] = fun;
break;
}
}
}
}
/* this is "read" mode */
else{
ltype = LIST_FILEORDER;
lmem = -1;
/* process as a space-delimited list of files */
while( _FunFile(fname, tbuf, SZ_LINE, &ip) ){
if( _FunKeyword(tbuf, "listorder", "FUN_LISTORDER", tbuf2, SZ_LINE) ){
if( !strncasecmp(tbuf2, "s", 1) )
ltype = LIST_SORT;
else if( !strncasecmp(tbuf2, "t", 1) )
ltype = LIST_TRYSORT;
else if( !strncasecmp(tbuf2, "u", 1) )
ltype = LIST_UNSORT;
else if( !strncasecmp(tbuf2, "f", 1) )
ltype = LIST_FILEORDER;
continue;
}
if( _FunKeyword(tbuf, "listmem", "FUN_LISTMEM", tbuf2, SZ_LINE) ){
lmem = (int)(atof(tbuf2)*1000000);
continue;
}
/* try to open this possible file */
if( !(tfun=_FunOpen(tbuf, name, tail, SZ_LINE, mode)) )
goto error;
if( !fun )
fun = tfun;
else if( last )
last->next = tfun;
last = tfun;
got++;
}
/* only set current if we actually have a list */
if( got == 1 )
fun->ltype = LIST_NONE;
else{
fun->ltype = ltype;
fun->lmem = lmem;
fun->current = fun;
/* list pre-processing */
for(cur=fun; cur; cur=cur->next){
/* set head of list */
cur->head = fun;
cur->lefp = tmpfile();
cur->lrfp = tmpfile();
}
}
}
return(fun);
error:
if( fun ) _FunFree(fun, 1);
return NULL;
}
#ifdef ANSI_FUNC
void
FunFlush(Fun fun, char *plist)
#else
void FunFlush(fun, plist)
Fun fun;
char *plist;
#endif
{
int i;
int pad;
int got;
int doref=0;
int dorest=0;
int doback=0;
int skip;
char *pbuf;
char tbuf[SZ_LINE];
Fun tfun=NULL;
GIO gios[1];
/* make sure we have something to do */
if( !_FunValid(fun) )
return;
/* check plist for copy mode -- but only if we have a reference handle */
if( fun->ifun ){
pbuf = xstrdup(plist);
if( _FunKeyword(pbuf, "copy", NULL, tbuf, SZ_LINE) ){
if( !strncasecmp(tbuf, "ref", 3) )
doref = 1;
else if( fun->icopy && !strncasecmp(tbuf, "remain", 6) )
dorest = 1;
}
if( pbuf ) xfree(pbuf);
}
else{
pbuf = xstrdup(plist);
if( _FunKeyword(pbuf, "copy", NULL, tbuf, SZ_LINE) ){
if( !strncasecmp(tbuf, "ref", 3) ){
doback = 1;
/* perform ordinary flush on each backlink */
for(i=0; i<FUN_MAXBFUN; i++){
if( fun->bfun[i] ){
FunFlush(fun->bfun[i], NULL);
}
}
}
}
if( pbuf ) xfree(pbuf);
}
/* If we did not set a type, perhaps because this is an output file
that we did not write to, we might be able to set the type now to
be the reference type. This will allow us to flush the ref header
to the output file. */
if( !fun->type && fun->ifun )
fun->type = fun->ifun->type;
/* if we are writing out the full reference extension, we just do it */
if( doref ){
/* copy header */
ft_headwrite(fun->gio, fun->ifun->header);
/* try to get back to the data, in case we read any already */
gseek(fun->ifun->gio, ft_data(fun->ifun->header), 0);
/* skip data, copying header if necessary */
gios[0] = fun->gio;
ft_dataskip(fun->ifun->gio, fun->ifun->header, gios, 1);
}
else{
/* for writing, we might have to output the FITS header, padding, etc. */
if( strchr(fun->mode, 'w') || strchr(fun->mode, 'a') ||
strchr(fun->mode, 'A') ){
/* process extension-specific flush */
switch(fun->type){
case FUN_IMAGE:
/* might have to write the header */
_FunImagePutHeader(fun, fun->dim1, fun->dim2, fun->bitpix);
/* pad to end of extension, if necessary */
pad = FT_BLOCK - (fun->bytes % FT_BLOCK);
if( pad && (pad != FT_BLOCK) ){
pbuf = (char *)xcalloc(pad, sizeof(char));
gwrite(fun->gio, pbuf, 1, pad);
xfree(pbuf);
fun->io = 0;
}
break;
case FUN_TABLE:
/* might have to write the header */
_FunTablePutHeader(fun);
/* try to fix the naxis2 param, and if so, write padding as well */
if( _FunFixNaxis2(fun) ){
pad = FT_BLOCK - (fun->bytes % FT_BLOCK);
if( pad && (pad != FT_BLOCK) ){
pbuf = (char *)xcalloc(pad, sizeof(char));
gwrite(fun->gio, pbuf, 1, pad);
xfree(pbuf);
fun->io = 0;
}
}
break;
default:
break;
}
}
}
/* if this is final flush, might have to copy remaining input extensions */
if( dorest || doback ){
if( dorest )
tfun = fun->ifun;
else if( doback )
tfun = fun;
/* might have to skip to end of this extension */
switch(tfun->type){
case FUN_IMAGE:
case FUN_ARRAY:
/* calculate bytes we should have read to end of extension, but didn't */
skip = ((MAX(tfun->dim2,1)*tfun->dim1)*ABS(tfun->dtype)) +
tfun->dpad - tfun->curpos;
if( skip ){
gskip(tfun->gio, (off_t)skip);
fun->curpos += skip;
}
break;
case FUN_TABLE:
case FUN_EVENTS:
/* calculate bytes we should have read to end of extension, but didn't */
skip = ((tfun->rawsize*tfun->total)+ft_pcount(tfun->header))-tfun->bytes;
/* if there are any ... */
if( skip ){
/* ... it also means we did not skip the padding */
pad = FT_BLOCK - ((tfun->rawsize*tfun->total) % FT_BLOCK);
if( pad == FT_BLOCK ) pad = 0;
skip += pad;
/* do it now */
gskip(tfun->gio, (off_t)skip);
}
break;
default:
break;
}
/* write out the rest of the reference file */
while( (got=gread(tfun->gio, tbuf, sizeof(char), SZ_LINE)) >0 ){
if( dorest ){
gwrite(fun->gio, tbuf, sizeof(char), got);
}
else if( doback ){
for(i=0; i<FUN_MAXBFUN; i++){
if( fun->bfun[i] && fun->bfun[i]->gio ){
gwrite(fun->bfun[i]->gio, tbuf, sizeof(char), got);
}
}
}
}
}
/* we can free up most structure, but leave enough to carry on */
_FunFree(fun,0);
/* since we just flushed, flag that we can start again */
fun->ops = 0;
}
#ifdef ANSI_FUNC
void
FunClose(Fun fun)
#else
void FunClose(fun)
Fun fun;
#endif
{
int i;
Fun tfun;
if( !_FunValid(fun) )
return;
/* close all files (this might be a list) */
while( fun ){
tfun = fun->next;
FunFlush(fun, "copy=remaining");
gclose(fun->gio);
fun->gio = NULL;
/* remove this handle from the backlink list of the reference file */
if( fun->ifun && (*(short *)fun->ifun == FUN_MAGIC) ){
for(i=0; i<FUN_MAXBFUN; i++){
if( fun->ifun->bfun[i] == fun ){
fun->ifun->bfun[i] = (Fun)NULL;
break;
}
}
}
/* if this is a ref file for other files, clear all of those ifun flags */
for(i=0; i<FUN_MAXBFUN; i++){
if( fun->bfun[i] && (*(short *)fun->bfun[i] == FUN_MAGIC) )
fun->bfun[i]->ifun = (Fun)NULL;;
}
_FunFree(fun,1);
fun = tfun;
}
}
|