1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354
|
# -*- coding: utf-8 -*-
# Licensed under a 3-clause BSD style license - see LICENSE.rst
#
# Gammapy documentation build configuration file.
#
# This file is execfile()d with the current directory set to its containing dir.
#
# Note that not all possible configuration values are present in this file.
#
# All configuration values have a default.
#
# If extensions (or modules to document with autodoc) are in another directory,
# add these directories to sys.path here. If the directory is relative to the
# documentation root, use os.path.abspath to make it absolute, like shown here.
# sys.path.insert(0, os.path.abspath('..'))
import datetime
import sys
import os
import gammapy
# Get project metadata
from importlib.metadata import metadata
# Sphinx-gallery config
from sphinx_gallery.sorting import ExplicitOrder
# Load utils docs functions
from gammapy.utils.docs import SubstitutionCodeBlock, DynamicPRLinkTransform, gammapy_sphinx_ext_activate
# flake8: noqa
# Add our custom directives to Sphinx
def setup(app):
"""
Add the custom directives to Sphinx.
"""
app.add_config_value("substitutions", [], "html")
app.add_directive("substitution-code-block", SubstitutionCodeBlock)
app.add_post_transform(DynamicPRLinkTransform)
distribution_name= "gammapy"
gammapy_metadata = metadata(distribution_name)
sys.path.insert(0, os.path.dirname(__file__))
linkcheck_anchors_ignore = []
linkcheck_ignore = [
"http://gamma-sky.net/#",
"https://forge.in2p3.fr/projects/data-challenge-1-dc-1/wiki",
"https://indico.cta-observatory.org/event/2070/",
"https://groups.google.com/forum/#!forum/astropy-dev",
"https://data.hawc-observatory.org/datasets/3hwc-survey/index.php",
"https://gammapy.slack.com/join/signup#/domain-signup",
# invalid certificates
"https://www.hawc-observatory.org/",
"https://data.hawc-observatory.org/datasets/crab_events_pass4/index.php",
"https://ipython.org",
"https://jupyter.org",
# private pages
"https://cchesswiki.in2p3.fr/*",
"https://github.com/VERITAS-Observatory/VEGAS",
]
# the buttons link to html pages which are auto-generated...
linkcheck_exclude_documents = [r"getting-started/.*"]
# -- General configuration ----------------------------------------------------
# By default, highlight as Python 3.
highlight_language = "python3"
# Matplotlib directive sets whether to show a link to the source in HTML
plot_html_show_source_link = False
# If true, figures, tables and code-blocks are automatically numbered if they have a caption
numfig = False
# The suffix of source filenames.
source_suffix = '.rst'
# The master toctree document.
master_doc = 'index'
# Allow to add the canonical html flag on all the pages
# This allows you to indicate to the web search engine that the pages for the stable version are privileged
html_baseurl = 'https://docs.gammapy.org/stable/'
# The reST default role (used for this markup: `text`) to use for all
# documents. Set to the "smart" one.
default_role = 'obj'
# Add any Sphinx extension module names here, as strings.
extensions = [
# Order for sphinx_automodapi is important
"sphinx.ext.autosummary",
"sphinx_automodapi.automodapi", # This should come after autosummary
"sphinx_automodapi.smart_resolver",
"sphinx_click.ext",
'sphinx_copybutton',
"sphinx_design",
"sphinx_gallery.gen_gallery",
"sphinx_changelog",
"sphinx.ext.doctest",
"sphinx.ext.intersphinx",
"sphinx.ext.mathjax",
'sphinx.ext.viewcode',
# Allows for mapping to other documentation projects
"sphinx.ext.intersphinx",
# Allows for Numpy docstring format
"numpydoc",
# Needed for the plot:: functionality in rst
"matplotlib.sphinxext.plot_directive",
]
# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
exclude_patterns = [
"**.ipynb_checkpoints",
"user-guide/model-gallery/*/*.ipynb",
"user-guide/model-gallery/*/*.md5",
"user-guide/model-gallery/*/*.py",
"_build",
]
# Define intersphinx_mapping
intersphinx_mapping = {
"python": ("https://docs.python.org/3/", None),
"numpy": ("https://numpy.org/doc/stable/", None),
"scipy": ("https://docs.scipy.org/doc/scipy/", None),
"matplotlib": ("https://matplotlib.org/", None),
"astropy": ("https://docs.astropy.org/en/stable/", None),
"regions": ("https://astropy-regions.readthedocs.io/en/latest/", None),
"reproject": ("https://reproject.readthedocs.io/en/latest/", None),
"naima": ("https://naima.readthedocs.io/en/latest/", None),
"gadf": ("https://gamma-astro-data-formats.readthedocs.io/en/latest/", None),
"iminuit": ("https://iminuit.readthedocs.io/en/latest/", None),
"pandas": ("https://pandas.pydata.org/pandas-docs/stable/", None),
}
# -- Options for autosummary/autodoc output ------------------------------------
# Enable generation of stub files
autosummary_generate = True
# Document inherited members
automodsumm_inherited_members = True
# Include class and __init__ docstrings
autoclass_content = "both"
# Directory for API docs
automodapi_toctreedirnm = 'api'
# Suppress member summaries
numpydoc_show_class_members = False
# autodoc options to make the AnalysisConfig look nice
autodoc_class_signature = "separated"
autodoc_typehints = "description"
# Ensures that when users click the "Copy" button, only the actual code is copied,
# excluding interactive prompts and indentation markers
# https://sphinx-copybutton.readthedocs.io/en/latest/use.html#using-regexp-prompt-identifiers
copybutton_prompt_text = r">>> |\.\.\. |\$ |In \[\d*\]: | {2,5}\.\.\.: | {5,8}: "
copybutton_prompt_is_regexp = True
# This is added to the end of RST files - a good place to put substitutions to
# be used globally.
rst_epilog = """
.. |Table| replace:: :class:`~astropy.table.Table`
.. |QTable| replace:: :class:`~astropy.table.QTable`
.. |BaseFrame| replace:: :class:`~astropy.coordinates.BaseCoordinateFrame`
.. |SkyCoord| replace:: :class:`~astropy.coordinates.SkyCoord`
"""
# This is added to keep the links to PRs in release notes
changelog_links_docpattern = [".*changelog.*", "whatsnew/.*", "release-notes/.*"]
# -- Project information -------------------------------------------------------
# This does not *have* to match the package name, but typically does
project = gammapy_metadata.get('Name')
author = gammapy_metadata.get('Author-email').split('<')[0].strip()
copyright = "{}, {}".format(datetime.datetime.now().year, author)
version = str(gammapy.__version__)
release = "X.Y.Z" if "dev" in version else version
switch_version = "dev" if "dev" in version else release
substitutions = [
("|release|", release),
]
# -- Options for HTML output ---------------------------------------------------
html_theme = "pydata_sphinx_theme"
# Static files to copy after template files
html_static_path = ["_static"]
html_css_files = ["custom.css"]
html_js_files = ["matomo.js"]
templates_path = ["_templates"]
# The name of an image file (within the static path) to use as favicon of the
# docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32
# pixels large.
html_logo = os.path.join(html_static_path[0], "gammapy_logo.png")
html_favicon = os.path.join(html_static_path[0], "gammapy_logo.ico")
# Custom sidebar templates, maps document names to template names.
html_sidebars = {
"search": ["search-field.html"],
"navigation": ["sidebar-nav-bs.html"],
}
# If not "", a "Last updated on:" timestamp is inserted at every page bottom,
# using the given strftime format.
# html_last_updated_fmt = ""
# The name for this set of Sphinx documents. If None, it defaults to
# "<project> v<release> documentation".
html_title = "{} v{}".format(project, release)
# Output file base name for HTML help builder.
htmlhelp_basename = f"{project}doc"
# Default for the configuration can be found here
# https://github.com/pydata/pydata-sphinx-theme/blob/main/src/pydata_sphinx_theme/theme/pydata_sphinx_theme/theme.conf
html_theme_options = {
"header_links_before_dropdown": 6,
"show_toc_level": 2,
# False = don't show "Previous" and "Next" buttons at the bottom of each page
"show_prev_next": False,
# links in menu
"icon_links": [
{
"name": "Github",
"url": "https://github.com/gammapy/gammapy",
"icon": "fab fa-github-square",
},
{
"name": "Slack",
"url": "https://gammapy.slack.com/",
"icon": "fab fa-slack",
},
],
"switcher": {
"json_url": "https://docs.gammapy.org/stable/switcher.json",
"version_match": switch_version,
},
"navbar_end": ["version-switcher", "theme-switcher", "navbar-icon-links"],
"navigation_with_keys": True,
# footers
"footer_start": ["copyright","custom-footer.html"],
"footer_center": ["last-updated"],
"footer_end": ["sphinx-version", "theme-version"]
}
gammapy_sphinx_ext_activate()
# -- Options for LaTeX output --------------------------------------------------
# Grouping the document tree into LaTeX files. List of tuples
# (source start file, target name, title, author, documentclass [howto/manual]).
latex_documents = [
("index", f"{project}.tex", f"{project} Documentation", author, "manual")
]
# -- Options for manual page output --------------------------------------------
# One entry per manual page. List of tuples
# (source start file, name, description, authors, manual section).
man_pages = [("index", project.lower(), f"{project} Documentation", [author], 1)]
# -- Other options -------------------------------------------------------------
github_issues_url = "https://github.com/gammapy/gammapy/issues/"
# In `about.rst` and `references.rst` we are giving lists of citations
# (e.g. papers using Gammapy) that partly aren't referenced from anywhere
# in the Gammapy docs. This is normal, but Sphinx emits a warning.
# The following config option suppresses the warning.
# http://www.sphinx-doc.org/en/stable/rest.html#citations
# http://www.sphinx-doc.org/en/stable/config.html#confval-suppress_warnings
suppress_warnings = ["ref.citation"]
branch = "main" if switch_version == "dev" else f"v{switch_version}"
binder_config = {
# Required keys
"org": "gammapy",
"repo": "gammapy-webpage",
"branch": branch, # Can be any branch, tag, or commit hash. Use a branch that hosts your docs.
"binderhub_url": "https://mybinder.org", # Any URL of a binderhub deployment. Must be full URL (e.g. https://mybinder.org).
"dependencies": "./binder/requirements.txt",
"notebooks_dir": f"notebooks/{switch_version}",
"use_jupyter_lab": True,
}
sphinx_gallery_conf = {
# Remove the sphinx comments i.e. sphinx_gallery_thumbnail_number in tutorials
"remove_config_comments": True,
"examples_dirs": [
"../examples/models",
"../examples/tutorials",
], # path to your example scripts
"gallery_dirs": [
"user-guide/model-gallery",
"tutorials",
], # path to where to save gallery generated output
"subsection_order": ExplicitOrder(
[
"../examples/models/spatial",
"../examples/models/spectral",
"../examples/models/temporal",
"../examples/tutorials/starting",
"../examples/tutorials/data",
"../examples/tutorials/model-gallery",
"../examples/tutorials/details",
"../examples/tutorials/analysis-1d",
"../examples/tutorials/analysis-2d",
"../examples/tutorials/analysis-3d",
"../examples/tutorials/analysis-time",
"../examples/tutorials/astrophysics",
"../examples/tutorials/scripts",
]
),
"binder": binder_config,
"backreferences_dir": "gen_modules/backreferences",
"doc_module": ("gammapy",),
"exclude_implicit_doc": {},
"filename_pattern": r"\.py",
"reset_modules": ("matplotlib",),
"within_subsection_order": "sphinxext.TutorialExplicitOrder",
"download_all_examples": True,
"capture_repr": ("_repr_html_", "__repr__"),
# Show sidebar dropdowns for menu
"nested_sections": True,
"min_reported_time": 10,
"show_memory": False,
"line_numbers": False,
"reference_url": {
# The module you locally document uses None
"gammapy": None,
},
}
html_context = {
"default_mode": "light",
}
|