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<html>
<head>
<title>
Molecular Structures
</title>
</head>
<h1 align=center>
Molecular Structures
</h1>
<hr size="3">
<font size="-1" color=RED>
PDB files, proteins, nucleic acids, vitamins, sugars, lipids, small organic
compounds, flavors,
garlic,
free molecular viewer and editor,
free molecular visualization program,
protein structure, DNA structure, PDB,
molecular rendering, biological macromolecule,
Unix, Linux, free software download, open source software,
Damir Zucic.
</font>
<hr size="3">
This page contains the list of sites with molecular structures. This list
contains only the sites which contain data in PDB format. Note that links
are subject to changes. If this happens, use Google or some other search
engine to find the site. Use the words (or even entire titles) from the
middle column as search terms.
<br><br>
<table border=1 cellspacing=0 cellpading=0>
<td align="center">
<b>
DATA
</b>
</td>
<td align="center">
<b>
LINK
</b>
</td>
<td align="center">
<b>
REFERENCE
</b>
</td>
<tr>
<td align="center">
Proteins and
<br>
Nucleic Acids
</td>
<td align="center">
The Protein Data Bank,
<br>
<a href="http://www.rcsb.org/pdb/">
http://www.rcsb.org/pdb/
</a>
</td>
<td align="left">
H.M.Berman, J.Westbrook, Z.Feng,
<br>
G.Gilliland, T.N.Bhat, H.Weissig,
<br>
I.N.Shindyalov, P.E.Bourne,
<br>
The Protein Data Bank,
<br>
Nucleic Acids Research 28,
<br>
pp. 235-242 (2000).
</td>
<tr>
<td align="center">
Hetero
<br>
Compounds
</td>
<td align="center">
Hetero-compound Information
<br>
Centre - Uppsala,
<br>
<a href="http://xray.bmc.uu.se/hicup/">
http://xray.bmc.uu.se/hicup/
</a>
</td>
<td align="left">
Kleywegt, G.J. and Jones, T.A. (1998).
<br>
Databases in protein crystallography.
<br>
Acta Cryst D54,
<br>
1119-1131 (CCP4 Proceedings).
</td>
<tr>
<td align="center">
Many Small
<br>
Molecules
</td>
<td align="center">
Molecular Models from Chemistry
<br>
at Okanagan University College,
<br>
<a href="http://people.ouc.bc.ca/woodcock/molecule/molecule.html">
http://people.ouc.bc.ca/woodcock/molecule/molecule.html
</a>
</td>
<td align="left">
Prepared by Dr. Dave Woodcock.
</td>
<tr>
<td align="center">
Smells
<br>
Database
</td>
<td align="center">
Smells Database, ChemConnections Project,
<br>
College of Chemistry, University of California, Berkeley,
<br>
<a href="http://mc2.cchem.berkeley.edu/Smells/index.html">
http://mc2.cchem.berkeley.edu/Smells/index.html
</a>
</td>
<td align="left">
ChemConnections Project.
</td>
<tr>
<td align="center">
Pedagogical
<br>
PDB's,
<br>
Vitamins
</td>
<td align="center">
Computer Based Resources
<br>
for Chemistry and Biochemistry Students,
<br>
Department of Chemistry, Georgia State University,
<br>
<a href="http://chemistry.gsu.edu/glactone/">
http://chemistry.gsu.edu/glactone/
</a>
</td>
<td align="left">
Glactone Project,
<br>
University System of Georgia.
</td>
<tr>
<td align="center">
Small
<br>
Organic
<br>
Compounds
</td>
<td align="center">
Klotho: Biochemical Compounds Declarative Database,
<br>
biocheminfo.org,
<br>
<a href="http://www.biocheminfo.org/klotho">
http://www.biocheminfo.org/klotho
</a>
<br>
Compound List:
<br>
<a href="http://www.biocheminfo.org/klotho/compound_list.html">
http://www.biocheminfo.org/klotho/compound_list.html
</a>
</td>
<td align="left">
Klotho: Biochemical Compounds
<br>
Declarative Database,
<br>
Brian H. Dunford-Shore,
<br>
Waheeda Sulaman, Brian Feng,
<br>
Francis Fabrizio, Jason Holcomb,
<br>
William Wise and Toni Kazic.
</td>
<tr>
<td align="center">
Vitamins
</td>
<td align="center">
PDB Files of the Vitamins and Their Cofactor Derivatives,
<br>
Glactone's CD-ROM of PDB Files,
<br>
Department of Chemistry, Georgia State University,
<br>
<a href="http://chemistry.gsu.edu/cwcs/MM-CD/workshop02/docs/vitamins.htm">
http://chemistry.gsu.edu/cwcs/MM-CD/workshop02/docs/vitamins.htm
</a>
</td>
<td align="left">
Glactone's CD-ROM of PDB Files.
</td>
<tr>
<td align="center">
Sugars
</td>
<td align="center">
PDB Files of Some Sugars,
<br>
Glactone's CD-ROM of PDB Files,
<br>
Department of Chemistry, Georgia State University,
<br>
<a href="http://chemistry.gsu.edu/cwcs/MM-CD/workshop02/docs/sugars.htm">
http://chemistry.gsu.edu/cwcs/MM-CD/workshop02/docs/sugars.htm
</a>
</td>
<td align="left">
Glactone's CD-ROM of PDB Files.
</td>
<tr>
<td align="center">
Lipids
</td>
<td align="center">
PDB Files of Some Lipids,
<br>
Glactone's CD-ROM of PDB Files,
<br>
Department of Chemistry, Georgia State University,
<br>
<a href="http://chemistry.gsu.edu/cwcs/MM-CD/workshop02/docs/lipids.htm">
http://chemistry.gsu.edu/cwcs/MM-CD/workshop02/docs/lipids.htm
</a>
</td>
<td align="left">
Glactone's CD-ROM of PDB Files.
</td>
<tr>
<td align="center">
Flavors
</td>
<td align="center">
PDB Files of Some Flavors,
<br>
Glactone's CD-ROM of PDB Files,
<br>
Department of Chemistry, Georgia State University,
<br>
<a href="http://chemistry.gsu.edu/cwcs/MM-CD/workshop02/docs/flavors.htm">
http://chemistry.gsu.edu/cwcs/MM-CD/workshop02/docs/flavors.htm
</a>
</td>
<td align="left">
Glactone's CD-ROM of PDB Files.
</td>
</table>
<hr size="3">
</html>
|
