File: MrProtocol.cxx

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/*=========================================================================

  Program: GDCM (Grassroots DICOM). A DICOM library

  Copyright (c) 2006-2011 Mathieu Malaterre
  All rights reserved.
  See Copyright.txt or http://gdcm.sourceforge.net/Copyright.html for details.

     This software is distributed WITHOUT ANY WARRANTY; without even
     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
     PURPOSE.  See the above copyright notice for more information.

=========================================================================*/
/*
 *
 */

/*
28 - 'MrProtocol' VM 1, VR UN, SyngoDT 0, NoOfItems 6, Data '### ASCCONV BEGIN ###
ulVersion                                = 0xbee332
tSequenceFileName                        = "%SiemensSeq%\fl_fq_shphs"
tProtocolName                            = "flash+AF8-100+AF8-through-plane+AF8-V"
tReferenceImage0                         = "1.3.12.2.1107.5.2.9.16041.30000007062106100181200004658"
tReferenceImage1                         = "1.3.12.2.1107.5.2.9.16041.30000007062106100181200004635"
tReferenceImage2                         = "1.3.12.2.1107.5.2.9.16041.30000007062106100181200004683"
ucScanRegionPosValid                     = 0x1
sProtConsistencyInfo.tBaselineString     = "N4_VB11A_LATEST_20031004"
sProtConsistencyInfo.flNominalB0         = 1.494
sProtConsistencyInfo.flGMax              = 22
sProtConsistencyInfo.flRiseTime          = 10
sGRADSPEC.sEddyCompensationX.aflAmplitude[0] = 0.0141111
sGRADSPEC.sEddyCompensationX.aflAmplitude[1] = 0.057038
sGRADSPEC.sEddyCompensationX.aflAmplitude[2] = -0.00986504
sGRADSPEC.sEddyCompensationX.aflAmplitude[3] = 0.00247627
sGRADSPEC.sEddyCompensationX.aflAmplitude[4] = 0.0026377
sGRADSPEC.sEddyCompensationX.aflTimeConstant[0] = 1.53826
sGRADSPEC.sEddyCompensationX.aflTimeConstant[1] = 0.746617
sGRADSPEC.sEddyCompensationX.aflTimeConstant[2] = 0.339236
sGRADSPEC.sEddyCompensationX.aflTimeConstant[3] = 0.0309809
sGRADSPEC.sEddyCompensationX.aflTimeConstant[4] = 0.00067694
sGRADSPEC.sEddyCompensationY.aflAmplitude[0] = 0.0156411
sGRADSPEC.sEddyCompensationY.aflAmplitude[1] = 0.0440623
sGRADSPEC.sEddyCompensationY.aflAmplitude[2] = -0.00782663
sGRADSPEC.sEddyCompensationY.aflAmplitude[3] = 0.00186828
sGRADSPEC.sEddyCompensationY.aflAmplitude[4] = 0.00154504
sGRADSPEC.sEddyCompensationY.aflTimeConstant[0] = 1.47145
sGRADSPEC.sEddyCompensationY.aflTimeConstant[1] = 0.750538
sGRADSPEC.sEddyCompensationY.aflTimeConstant[2] = 0.339397
sGRADSPEC.sEddyCompensationY.aflTimeConstant[3] = 0.0312962
sGRADSPEC.sEddyCompensationY.aflTimeConstant[4] = 0.000895133
sGRADSPEC.sEddyCompensationZ.aflAmplitude[0] = 0.00618504
sGRADSPEC.sEddyCompensationZ.aflAmplitude[1] = 0.00313121
sGRADSPEC.sEddyCompensationZ.aflAmplitude[2] = 0.000289346
sGRADSPEC.sEddyCompensationZ.aflAmplitude[3] = -0.00019677
sGRADSPEC.sEddyCompensationZ.aflAmplitude[4] = 7.66445e-005
sGRADSPEC.sEddyCompensationZ.aflTimeConstant[0] = 3.37462
sGRADSPEC.sEddyCompensationZ.aflTimeConstant[1] = 0.999351
sGRADSPEC.sEddyCompensationZ.aflTimeConstant[2] = 0.0174646
sGRADSPEC.sEddyCompensationZ.aflTimeConstant[3] = 0.0110094
sGRADSPEC.sEddyCompensationZ.aflTimeConstant[4] = 0.00199922
sGRADSPEC.bEddyCompensationValid         = 1
sGRADSPEC.sB0CompensationX.aflAmplitude[0] = 0.307474
sGRADSPEC.sB0CompensationX.aflAmplitude[1] = 0.029337
sGRADSPEC.sB0CompensationX.aflAmplitude[2] = -0.187118
sGRADSPEC.sB0CompensationX.aflTimeConstant[0] = 0.98583
sGRADSPEC.sB0CompensationX.aflTimeConstant[1] = 0.0308443
sGRADSPEC.sB0CompensationX.aflTimeConstant[2] = 0.000466792
sGRADSPEC.sB0CompensationY.aflAmplitude[0] = 0.365257
sGRADSPEC.sB0CompensationY.aflAmplitude[1] = -0.318647
sGRADSPEC.sB0CompensationY.aflAmplitude[2] = -0.0118978
sGRADSPEC.sB0CompensationY.aflTimeConstant[0] = 0.61535
sGRADSPEC.sB0CompensationY.aflTimeConstant[1] = 0.488831
sGRADSPEC.sB0CompensationY.aflTimeConstant[2] = 0.00199991
sGRADSPEC.sB0CompensationZ.aflAmplitude[0] = -0.44647
sGRADSPEC.sB0CompensationZ.aflAmplitude[1] = -0.0455154
sGRADSPEC.sB0CompensationZ.aflAmplitude[2] = -0.0304901
sGRADSPEC.sB0CompensationZ.aflTimeConstant[0] = 0.959231
sGRADSPEC.sB0CompensationZ.aflTimeConstant[1] = 0.0720189
sGRADSPEC.sB0CompensationZ.aflTimeConstant[2] = 0.00190141
sGRADSPEC.bB0CompensationValid           = 1
sGRADSPEC.sCrossTermCompensationXY.aflAmplitude[0] = 0.00105046
sGRADSPEC.sCrossTermCompensationXY.aflTimeConstant[0] = 0.842014
sGRADSPEC.sCrossTermCompensationXZ.aflAmplitude[0] = -0.00150189
sGRADSPEC.sCrossTermCompensationXZ.aflTimeConstant[0] = 0.736169
sGRADSPEC.sCrossTermCompensationYX.aflAmplitude[0] = -5.5278e-005
sGRADSPEC.sCrossTermCompensationYX.aflTimeConstant[0] = 0.228697
sGRADSPEC.sCrossTermCompensationYZ.aflAmplitude[0] = 0.000307999
sGRADSPEC.sCrossTermCompensationYZ.aflTimeConstant[0] = 1.19431
sGRADSPEC.sCrossTermCompensationZX.aflAmplitude[0] = -0.000286868
sGRADSPEC.sCrossTermCompensationZX.aflTimeConstant[0] = 0.665979
sGRADSPEC.sCrossTermCompensationZY.aflAmplitude[0] = 0.000355175
sGRADSPEC.sCrossTermCompensationZY.aflTimeConstant[0] = 0.844189
sGRADSPEC.bCrossTermCompensationValid    = 1
sGRADSPEC.lOffsetX                       = 25
sGRADSPEC.lOffsetY                       = 84
sGRADSPEC.lOffsetZ                       = 47
sGRADSPEC.bOffsetValid                   = 1
sGRADSPEC.lDelayX                        = 12
sGRADSPEC.lDelayY                        = 11
sGRADSPEC.lDelayZ                        = 9
sGRADSPEC.bDelayValid                    = 1
sGRADSPEC.flSensitivityX                 = 0.000264087
sGRADSPEC.flSensitivityY                 = 0.000272009
sGRADSPEC.flSensitivityZ                 = 0.000272677
sGRADSPEC.bSensitivityValid              = 1
sGRADSPEC.alShimCurrent[0]               = 183
sGRADSPEC.alShimCurrent[1]               = -25
sGRADSPEC.alShimCurrent[2]               = -85
sGRADSPEC.alShimCurrent[3]               = 378
sGRADSPEC.alShimCurrent[4]               = 82
sGRADSPEC.bShimCurrentValid              = 1
sGRADSPEC.ucMode                         = 0x2
sTXSPEC.asNucleusInfo[0].tNucleus        = "1H"
sTXSPEC.asNucleusInfo[0].lFrequency      = 63684693
sTXSPEC.asNucleusInfo[0].bFrequencyValid = 1
sTXSPEC.asNucleusInfo[0].flReferenceAmplitude = 359.734
sTXSPEC.asNucleusInfo[0].bReferenceAmplitudeValid = 1
sTXSPEC.asNucleusInfo[0].flAmplitudeCorrection = 1
sTXSPEC.asNucleusInfo[0].bAmplitudeCorrectionValid = 1
sTXSPEC.asNucleusInfo[1].bFrequencyValid = 1
sTXSPEC.asNucleusInfo[1].bReferenceAmplitudeValid = 1
sTXSPEC.asNucleusInfo[1].bAmplitudeCorrectionValid = 1
sTXSPEC.aRFPULSE[0].tName                = "03GreFCE"
sTXSPEC.aRFPULSE[0].bAmplitudeValid      = 0x1
sTXSPEC.aRFPULSE[0].flAmplitude          = 147.095
sTXSPEC.aRFPULSE[1].tName                = "02GreFCE"
sTXSPEC.aRFPULSE[1].bAmplitudeValid      = 0x1
sTXSPEC.aRFPULSE[1].flAmplitude          = 147.095
sTXSPEC.aRFPULSE[2].tName                = "01GreFCE"
sTXSPEC.aRFPULSE[2].bAmplitudeValid      = 0x1
sTXSPEC.aRFPULSE[2].flAmplitude          = 147.095
sTXSPEC.lNoOfTraPulses                   = 3
sTXSPEC.lBTB1ParallelCapacity            = 2
sTXSPEC.lBTB1SerialCapacity              = 24
sTXSPEC.lBTB2ParallelCapacity            = 2
sTXSPEC.lBTB2SerialCapacity              = 26
sTXSPEC.bBTBValid                        = 1
sTXSPEC.flKDynMagnitudeMin               = 0.5
sTXSPEC.flKDynMagnitudeMax               = 1.5
sTXSPEC.flKDynMagnitudeClipLow           = 0.96
sTXSPEC.flKDynMagnitudeClipHigh          = 1.04
sTXSPEC.flKDynPhaseMax                   = 0.698132
sTXSPEC.flKDynPhaseClip                  = 0.174533
sTXSPEC.bKDynValid                       = 1
sTXSPEC.ucRFPulseType                    = 0x1
sTXSPEC.ucExcitMode                      = 0x1
sTXSPEC.ucSimultaneousExcitation         = 0x1
sRXSPEC.lGain                            = 1
sRXSPEC.bGainValid                       = 1
sRXSPEC.aFFT_SCALE[0].lRxChannel         = 1
sRXSPEC.aFFT_SCALE[0].flFactor           = 1.06857
sRXSPEC.aFFT_SCALE[0].bValid             = 1
sRXSPEC.aFFT_SCALE[1].lRxChannel         = 2
sRXSPEC.aFFT_SCALE[1].flFactor           = 1.07454
sRXSPEC.aFFT_SCALE[1].bValid             = 1
sRXSPEC.aFFT_SCALE[2].lRxChannel         = 3
sRXSPEC.aFFT_SCALE[2].flFactor           = 1.06622
sRXSPEC.aFFT_SCALE[2].bValid             = 1
sRXSPEC.aFFT_SCALE[3].lRxChannel         = 4
sRXSPEC.aFFT_SCALE[3].flFactor           = 1.06524
sRXSPEC.aFFT_SCALE[3].bValid             = 1
sRXSPEC.aFFT_SCALE[4].lRxChannel         = 5
sRXSPEC.aFFT_SCALE[4].flFactor           = 0.982692
sRXSPEC.aFFT_SCALE[4].bValid             = 1
sRXSPEC.aFFT_SCALE[5].lRxChannel         = 6
sRXSPEC.aFFT_SCALE[5].flFactor           = 0.988603
sRXSPEC.aFFT_SCALE[5].bValid             = 1
sRXSPEC.aFFT_SCALE[6].lRxChannel         = 7
sRXSPEC.aFFT_SCALE[6].flFactor           = 0.981538
sRXSPEC.aFFT_SCALE[6].bValid             = 1
sRXSPEC.aFFT_SCALE[7].lRxChannel         = 8
sRXSPEC.aFFT_SCALE[7].flFactor           = 1.00856
sRXSPEC.aFFT_SCALE[7].bValid             = 1
sRXSPEC.bVariCapVoltagesValid            = 1
sRXSPEC.alDwellTime[0]                   = 8500
sAdjFreSpec.ulMode                       = 0x1
sAdjFreSpec.ucAdjWithBC                  = 0x1
sAdjTraSpec.ucAdjWithBC                  = 0x1
sAdjShimSpec.ulMode                      = 0x1
sAdjShimSpec.ucAdjWithBC                 = 0x1
sAdjWatSupSpec.ulMode                    = 0x1
sAdjWatSupSpec.ucAdjWithBC               = 0x1
alTR[0]                                  = 37000
lContrasts                               = 1
alTE[0]                                  = 4000
acFlowComp[0]                            = 1
lCombinedEchoes                          = 1
sSliceArray.asSlice[0].sPosition.dSag    = 35.31199581
sSliceArray.asSlice[0].sPosition.dCor    = -8.387765754
sSliceArray.asSlice[0].sPosition.dTra    = -23.13178296
sSliceArray.asSlice[0].sNormal.dSag      = 0.771051253
sSliceArray.asSlice[0].sNormal.dCor      = 0.5863890019
sSliceArray.asSlice[0].sNormal.dTra      = -0.2482496801
sSliceArray.asSlice[0].dThickness        = 6
sSliceArray.asSlice[0].dPhaseFOV         = 187.5
sSliceArray.asSlice[0].dReadoutFOV       = 250
sSliceArray.lSize                        = 1
sSliceArray.lSag                         = 1
sSliceArray.lConc                        = 1
sSliceArray.ucMode                       = 0x1
sSliceArray.sTSat.dThickness             = 40
sSliceArray.sTSat.dGap                   = 10
sGroupArray.asGroup[0].nSize             = 1
sGroupArray.asGroup[0].dDistFact         = 0.2
sGroupArray.anMember[1]                  = -1
sGroupArray.lSize                        = 1
sGroupArray.sPSat.dThickness             = 50
sGroupArray.sPSat.dGap                   = 10
sAutoAlign.dAAMatrix[0]                  = 1
sAutoAlign.dAAMatrix[5]                  = 1
sAutoAlign.dAAMatrix[10]                 = 1
sAutoAlign.dAAMatrix[15]                 = 1
sNavigatorPara.ucRespComp                = 0x4
sPrepPulses.ucFatSat                     = 0x4
sPrepPulses.ucWaterSat                   = 0x4
sPrepPulses.ucInversion                  = 0x4
sPrepPulses.ucSatRecovery                = 0x1
sPrepPulses.ucFatSatMode                 = 0x2
sKSpace.lBaseResolution                  = 256
sKSpace.lPhaseEncodingLines              = 192
sKSpace.dPhaseResolution                 = 1
sKSpace.lPartitions                      = 32
sKSpace.lImagesPerSlab                   = 32
sKSpace.dSliceResolution                 = 1
sKSpace.ucPhasePartialFourier            = 0x10
sKSpace.ucSlicePartialFourier            = 0x10
sKSpace.ucAveragingMode                  = 0x2
sKSpace.ucMultiSliceMode                 = 0x1
sKSpace.ucDimension                      = 0x2
sKSpace.ucAsymmetricEchoAllowed          = 0x1
sKSpace.unReordering                     = 0x1
sFastImaging.lEPIFactor                  = 1
sFastImaging.lTurboFactor                = 1
sFastImaging.lSegments                   = 3
sFastImaging.ulEnableRFSpoiling          = 0x1
sPhysioImaging.lSignal1                  = 2
sPhysioImaging.lMethod1                  = 2
sPhysioImaging.lSignal2                  = 1
sPhysioImaging.lMethod2                  = 1
sPhysioImaging.lPhases                   = 21
sPhysioImaging.lRetroGatedImages         = 16
sPhysioImaging.sPhysioECG.lScanWindow    = 805
sPhysioImaging.sPhysioECG.lTriggerPulses = 1
sPhysioImaging.sPhysioECG.lTriggerWindow = 5
sPhysioImaging.sPhysioECG.lArrhythmiaDetection = 1
sPhysioImaging.sPhysioECG.lCardiacGateOnThreshold = 100000
sPhysioImaging.sPhysioECG.lCardiacGateOffThreshold = 700000
sPhysioImaging.sPhysioPulse.lTriggerPulses = 1
sPhysioImaging.sPhysioPulse.lTriggerWindow = 5
sPhysioImaging.sPhysioPulse.lCardiacGateOnThreshold = 100000
sPhysioImaging.sPhysioPulse.lCardiacGateOffThreshold = 700000
sPhysioImaging.sPhysioExt.lTriggerPulses = 1
sPhysioImaging.sPhysioExt.lTriggerWindow = 5
sPhysioImaging.sPhysioExt.lCardiacGateOnThreshold = 100000
sPhysioImaging.sPhysioExt.lCardiacGateOffThreshold = 700000
sPhysioImaging.sPhysioResp.lRespGateThreshold = 20
sPhysioImaging.sPhysioResp.lRespGatePhase = 2
sPhysioImaging.sPhysioResp.dGatingRatio  = 0.3
sSpecPara.lPhaseCyclingType              = 1
sSpecPara.lPhaseEncodingType             = 1
sSpecPara.lRFExcitationBandwidth         = 1
sSpecPara.ucRemoveOversampling           = 0x1
sSpecPara.lDecouplingType                = 1
sSpecPara.lNOEType                       = 1
sSpecPara.lExcitationType                = 1
sSpecPara.lSpectralSuppression           = 1
sDiffusion.ulMode                        = 0x1
sAngio.sFlowArray.asElm[0].nVelocity     = 100
sAngio.sFlowArray.asElm[0].nDir          = 0x4
sAngio.sFlowArray.lSize                  = 1
sAngio.ucPCFlowMode                      = 0x2
sAngio.ucTOFInflow                       = 0x4
sAngio.ucRephasedImage                   = 0x1
sAngio.ucPhaseImage                      = 0x1
sEllipticalFilter.ucMode                 = 0x1
sPat.lAccelFactPE                        = 1
sPat.lAccelFact3D                        = 1
sPat.ucPATMode                           = 0x1
sPat.ucRefScanMode                       = 0x1
ucAutoMovie                              = 0x1
ucDisableChangeStoreImages               = 0x1
ucReconstructionMode                     = 0x1
ucPHAPSMode                              = 0x1
ucDixon                                  = 0x1
lAverages                                = 2
adFlipAngleDegree[0]                     = 30
lScanTimeSec                             = 103
lTotalScanTimeSec                        = 112
dRefSNR                                  = 165404.1473
dRefSNR_VOI                              = 165404.1473
tdefaultEVAProt                          = "%SiemensEvaDefProt%\Inline\Inline.evp"
tcurrentEVAProt                          = "%CURRENTEVAPROT%\EVA2A5.tmp"
sCOIL_SELECT_MEAS.asList[0].sCoilElementID.tCoilID = "6_Ch_Body_P"
sCOIL_SELECT_MEAS.asList[0].sCoilElementID.lCoilCopy = 1
sCOIL_SELECT_MEAS.asList[0].sCoilElementID.tElement = "PP6"
sCOIL_SELECT_MEAS.asList[0].lElementSelected = 1
sCOIL_SELECT_MEAS.asList[0].lRxChannelConnected = 1
sCOIL_SELECT_MEAS.asList[1].sCoilElementID.tCoilID = "6_Ch_Body_P"
sCOIL_SELECT_MEAS.asList[1].sCoilElementID.lCoilCopy = 1
sCOIL_SELECT_MEAS.asList[1].sCoilElementID.tElement = "PP5"
sCOIL_SELECT_MEAS.asList[1].lElementSelected = 1
sCOIL_SELECT_MEAS.asList[1].lRxChannelConnected = 1
sCOIL_SELECT_MEAS.asList[2].sCoilElementID.tCoilID = "6_Ch_Body_P"
sCOIL_SELECT_MEAS.asList[2].sCoilElementID.lCoilCopy = 1
sCOIL_SELECT_MEAS.asList[2].sCoilElementID.tElement = "PP3"
sCOIL_SELECT_MEAS.asList[2].lElementSelected = 1
sCOIL_SELECT_MEAS.asList[2].lRxChannelConnected = 2
sCOIL_SELECT_MEAS.asList[3].sCoilElementID.tCoilID = "6_Ch_Body_P"
sCOIL_SELECT_MEAS.asList[3].sCoilElementID.lCoilCopy = 1
sCOIL_SELECT_MEAS.asList[3].sCoilElementID.tElement = "PP4"
sCOIL_SELECT_MEAS.asList[3].lElementSelected = 1
sCOIL_SELECT_MEAS.asList[3].lRxChannelConnected = 3
sCOIL_SELECT_MEAS.asList[4].sCoilElementID.tCoilID = "6_Ch_Body_P"
sCOIL_SELECT_MEAS.asList[4].sCoilElementID.lCoilCopy = 1
sCOIL_SELECT_MEAS.asList[4].sCoilElementID.tElement = "PP2"
sCOIL_SELECT_MEAS.asList[4].lElementSelected = 1
sCOIL_SELECT_MEAS.asList[4].lRxChannelConnected = 4
sCOIL_SELECT_MEAS.asList[5].sCoilElementID.tCoilID = "6_Ch_Body_P"
sCOIL_SELECT_MEAS.asList[5].sCoilElementID.lCoilCopy = 1
sCOIL_SELECT_MEAS.asList[5].sCoilElementID.tElement = "PP1"
sCOIL_SELECT_MEAS.asList[5].lElementSelected = 1
sCOIL_SELECT_MEAS.asList[5].lRxChannelConnected = 4
sCOIL_SELECT_MEAS.asList[6].sCoilElementID.tCoilID = "6_Ch_Body_A"
sCOIL_SELECT_MEAS.asList[6].sCoilElementID.lCoilCopy = 1
sCOIL_SELECT_MEAS.asList[6].sCoilElementID.tElement = "PA6"
sCOIL_SELECT_MEAS.asList[6].lElementSelected = 1
sCOIL_SELECT_MEAS.asList[6].lRxChannelConnected = 5
sCOIL_SELECT_MEAS.asList[7].sCoilElementID.tCoilID = "6_Ch_Body_A"
sCOIL_SELECT_MEAS.asList[7].sCoilElementID.lCoilCopy = 1
sCOIL_SELECT_MEAS.asList[7].sCoilElementID.tElement = "PA5"
sCOIL_SELECT_MEAS.asList[7].lElementSelected = 1
sCOIL_SELECT_MEAS.asList[7].lRxChannelConnected = 5
sCOIL_SELECT_MEAS.asList[8].sCoilElementID.tCoilID = "6_Ch_Body_A"
sCOIL_SELECT_MEAS.asList[8].sCoilElementID.lCoilCopy = 1
sCOIL_SELECT_MEAS.asList[8].sCoilElementID.tElement = "PA3"
sCOIL_SELECT_MEAS.asList[8].lElementSelected = 1
sCOIL_SELECT_MEAS.asList[8].lRxChannelConnected = 6
sCOIL_SELECT_MEAS.asList[9].sCoilElementID.tCoilID = "6_Ch_Body_A"
sCOIL_SELECT_MEAS.asList[9].sCoilElementID.lCoilCopy = 1
sCOIL_SELECT_MEAS.asList[9].sCoilElementID.tElement = "PA4"
sCOIL_SELECT_MEAS.asList[9].lElementSelected = 1
sCOIL_SELECT_MEAS.asList[9].lRxChannelConnected = 7
sCOIL_SELECT_MEAS.asList[10].sCoilElementID.tCoilID = "6_Ch_Body_A"
sCOIL_SELECT_MEAS.asList[10].sCoilElementID.lCoilCopy = 1
sCOIL_SELECT_MEAS.asList[10].sCoilElementID.tElement = "PA2"
sCOIL_SELECT_MEAS.asList[10].lElementSelected = 1
sCOIL_SELECT_MEAS.asList[10].lRxChannelConnected = 8
sCOIL_SELECT_MEAS.asList[11].sCoilElementID.tCoilID = "6_Ch_Body_A"
sCOIL_SELECT_MEAS.asList[11].sCoilElementID.lCoilCopy = 1
sCOIL_SELECT_MEAS.asList[11].sCoilElementID.tElement = "PA1"
sCOIL_SELECT_MEAS.asList[11].lElementSelected = 1
sCOIL_SELECT_MEAS.asList[11].lRxChannelConnected = 8
sCOIL_SELECT_MEAS.sCOILPLUGS.aulPlugId[0] = 0xff
sCOIL_SELECT_MEAS.sCOILPLUGS.aulPlugId[1] = 0x76
sCOIL_SELECT_MEAS.sCOILPLUGS.aulPlugId[2] = 0x78
sCOIL_SELECT_MEAS.sCOILPLUGS.aulPlugId[3] = 0x87
sCOIL_SELECT_MEAS.sCOILPLUGS.aulPlugId[4] = 0x67
sCOIL_SELECT_MEAS.sCOILPLUGS.auiNmbrOfNibbles[0] = 0x2
sCOIL_SELECT_MEAS.sCOILPLUGS.auiNmbrOfNibbles[1] = 0x2
sCOIL_SELECT_MEAS.sCOILPLUGS.auiNmbrOfNibbles[2] = 0x2
sCOIL_SELECT_MEAS.sCOILPLUGS.auiNmbrOfNibbles[3] = 0x2
sCOIL_SELECT_MEAS.sCOILPLUGS.auiNmbrOfNibbles[4] = 0x2
sEFISPEC.bEFIDataValid                   = 1
### ASCCONV END ###
'
*/

/*
 * Table of equivalence:
 *
ulVersion                                = 0xbee332
<=>
27 - 'MrProtocolVersion' VM 1, VR IS, SyngoDT 6, NoOfItems 6, Data '12510002'
*/

#include "gdcmReader.h"
#include "gdcmImageReader.h"
#include "gdcmImageWriter.h"
#include "gdcmCSAHeader.h"
#include "gdcmAttribute.h"
#include "gdcmGlobal.h"
#include "gdcmDicts.h"

#include <map>

#include <math.h>

int main(int argc, char *argv [])
{
  if( argc < 2 ) return 1;
  const char *filename = argv[1];
  gdcm::ImageReader reader;
  reader.SetFileName( filename );
  if( !reader.Read() )
    {
    std::cerr << "Failed to read: " << filename << std::endl;
    return 1;
    }

  gdcm::CSAHeader csa;
  const gdcm::DataSet& ds = reader.GetFile().GetDataSet();

  //const gdcm::PrivateTag &t1 = csa.GetCSAImageHeaderInfoTag();
  const gdcm::PrivateTag &t2 = csa.GetCSASeriesHeaderInfoTag();

  if( ds.FindDataElement( t2 ) )
    {
    csa.LoadFromDataElement( ds.GetDataElement( t2 ) );
    //csa.Print( std::cout );
    }

  if( !csa.FindCSAElementByName( "MrProtocol" ) )
    {
    return 1;
    }
  const gdcm::CSAElement &csael = csa.GetCSAElementByName( "MrProtocol" );
  //std::cout << csael << std::endl;

  const gdcm::ByteValue *bv = csael.GetByteValue();
  if( !bv )
    {
    return 1;
    }
  std::string str(bv->GetPointer(), bv->GetLength());
  std::istringstream is(str);
  std::string s;
  typedef std::map< std::string, std::string > MyMapType;
  MyMapType mymap;
  while( std::getline(is, s ) )
    {
    std::string::size_type pos = s.find( '=' );
    if( pos != std::string::npos )
      {
      std::string sub1 = s.substr(0, pos);
      sub1.erase( sub1.find_last_not_of(' ') + 1);
      std::string sub2 = s.substr(pos+1); // skip the '=' char
      sub2.erase( 0, sub2.find_first_not_of(' '));
      //std::cout << sub1 << std::endl;
      mymap.insert( MyMapType::value_type(sub1, sub2) );
      }
    else
      {
      // ### ASCCONV BEGIN ###
      // ### ASCCONV END ###
      }
    }
  const char fourierstr[] = "sKSpace.ucSlicePartialFourier";
  const gdcm::CSAHeaderDict &csadict = gdcm::Global::GetInstance().GetDicts().GetCSAHeaderDict();
  const gdcm::CSAHeaderDictEntry &fourier = csadict.GetCSAHeaderDictEntry( fourierstr );
  std::cout << fourier << std::endl;
  MyMapType::const_iterator it = mymap.find ( fourierstr );
  if( it == mymap.end() ) return 1;
  //std::cout << it->second << std::endl;
  const std::string &partial_fourier = it->second;
  if( partial_fourier == "0x1" )
    {
    std::cout << "partial fourier is 4/8" << std::endl;
    }
  else if( partial_fourier == "0x2" )
    {
    std::cout << "partial fourier is 5/8" << std::endl;
    }
  else if( partial_fourier == "0x4" )
    {
    std::cout << "partial fourier is 6/8" << std::endl;
    }
  else if( partial_fourier == "0x8" )
    {
    std::cout << "partial fourier is 7/8" << std::endl;
    }
  else if( partial_fourier == "0x10" )
    {
    std::cout << "partial fourier is 8/8" << std::endl;
    }
  else
    {
    std::cerr << "Impossible: " << partial_fourier << std::endl;
    return 1;
    }
/*
This is the Flip Angle:
adFlipAngleDegree[0]                     = 30

One can find it also in the protocol:

...
      <ParamFunctor.""T1mapFunctor"">
      {
        <Class> ""T1mapFunctor@IceImagePostProcFunctors""

        <ParamBool.""EXECUTE"">  { }
        <ParamDouble.""Flip1_deg"">  { <Precision> 16  14.7378520000000000  }
...

*/
  // Below is an attemp to play with the CSAHeader dict:
#if 0
  const char gspec[] = "sGRADSPEC.flSensitivityX";
  it = mymap.find( gspec );
  if( it == mymap.end() ) return 1;
  const std::string &dummy = it->second;
  std::cout << dummy << std::endl;

  const gdcm::CSAHeaderDictEntry &csaentry = csadict.GetCSAHeaderDictEntry( gspec );
  std::cout << csaentry  << std::endl;
#endif


/*
    sSliceArray.ucMode -- should be in (1, 2, 4)
    enum SeriesMode
    {
      ASCENDING   = 0x01,
      DESCENDING  = 0x02,
      INTERLEAVED = 0x04
    };
*/
  const char sliceorderstr[] = "sSliceArray.ucMode";
  const gdcm::CSAHeaderDictEntry &sliceorder = csadict.GetCSAHeaderDictEntry( sliceorderstr );
  std::cout << sliceorder << std::endl;

  it = mymap.find ( sliceorderstr );
  if( it == mymap.end() ) return 1;
  const std::string &slice_order = it->second;
  if( slice_order == "0x1" )
    {
    std::cout << "slice_order: ASCENDING" << std::endl;
    }
  else if( slice_order == "0x2" )
    {
    std::cout << "slice_order: DESCENDING" << std::endl;
    }
  else if( slice_order == "0x4" )
    {
    std::cout << "slice_order: INTERLEAVED" << std::endl;
    }
  else
    {
    std::cerr << "Impossible: " << slice_order << std::endl;
    return 1;
    }

  return 0;
}