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/*=========================================================================
Program: GDCM (Grassroots DICOM). A DICOM library
Copyright (c) 2006-2011 Mathieu Malaterre
All rights reserved.
See Copyright.txt or http://gdcm.sourceforge.net/Copyright.html for details.
This software is distributed WITHOUT ANY WARRANTY; without even
the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
PURPOSE. See the above copyright notice for more information.
=========================================================================*/
#include "gdcmPrinter.h"
#include "gdcmSequenceOfItems.h"
#include "gdcmSequenceOfFragments.h"
#include "gdcmDict.h"
#include "gdcmDicts.h"
#include "gdcmGroupDict.h"
#include "gdcmVR.h"
#include "gdcmVM.h"
#include "gdcmElement.h"
#include "gdcmGlobal.h"
#include "gdcmAttribute.h"
#include "gdcmDataSetHelper.h"
#include "gdcmDataSet.h"
#include <typeinfo> // for typeid
#define gdcm_terminal_vt100_normal "\33[0m"
#define gdcm_terminal_vt100_bold "\33[1m"
#define gdcm_terminal_vt100_underline "\33[4m"
#define gdcm_terminal_vt100_blink "\33[5m"
#define gdcm_terminal_vt100_inverse "\33[7m"
#define gdcm_terminal_vt100_foreground_black "\33[30m"
#define gdcm_terminal_vt100_foreground_red "\33[31m"
#define gdcm_terminal_vt100_foreground_green "\33[32m"
#define gdcm_terminal_vt100_foreground_yellow "\33[33m"
#define gdcm_terminal_vt100_foreground_blue "\33[34m"
#define gdcm_terminal_vt100_foreground_magenta "\33[35m"
#define gdcm_terminal_vt100_foreground_cyan "\33[36m"
#define gdcm_terminal_vt100_foreground_white "\33[37m"
#define gdcm_terminal_vt100_background_black "\33[40m"
#define gdcm_terminal_vt100_background_red "\33[41m"
#define gdcm_terminal_vt100_background_green "\33[42m"
#define gdcm_terminal_vt100_background_yellow "\33[43m"
#define gdcm_terminal_vt100_background_blue "\33[44m"
#define gdcm_terminal_vt100_background_magenta "\33[45m"
#define gdcm_terminal_vt100_background_cyan "\33[46m"
#define gdcm_terminal_vt100_background_white "\33[47m"
static const char * GDCM_TERMINAL_VT100_NORMAL = "";
static const char * GDCM_TERMINAL_VT100_BOLD = "";
static const char * GDCM_TERMINAL_VT100_UNDERLINE = "";
static const char * GDCM_TERMINAL_VT100_BLINK = "";
static const char * GDCM_TERMINAL_VT100_INVERSE = "";
static const char * GDCM_TERMINAL_VT100_FOREGROUND_BLACK = "";
static const char * GDCM_TERMINAL_VT100_FOREGROUND_RED = "";
static const char * GDCM_TERMINAL_VT100_FOREGROUND_GREEN = "";
static const char * GDCM_TERMINAL_VT100_FOREGROUND_YELLOW = "";
static const char * GDCM_TERMINAL_VT100_FOREGROUND_BLUE = "";
static const char * GDCM_TERMINAL_VT100_FOREGROUND_MAGENTA = "";
static const char * GDCM_TERMINAL_VT100_FOREGROUND_CYAN = "";
static const char * GDCM_TERMINAL_VT100_FOREGROUND_WHITE = "";
static const char * GDCM_TERMINAL_VT100_BACKGROUND_BLACK = "";
static const char * GDCM_TERMINAL_VT100_BACKGROUND_RED = "";
static const char * GDCM_TERMINAL_VT100_BACKGROUND_GREEN = "";
static const char * GDCM_TERMINAL_VT100_BACKGROUND_YELLOW = "";
static const char * GDCM_TERMINAL_VT100_BACKGROUND_BLUE = "";
static const char * GDCM_TERMINAL_VT100_BACKGROUND_MAGENTA = "";
static const char * GDCM_TERMINAL_VT100_BACKGROUND_CYAN = "";
static const char * GDCM_TERMINAL_VT100_BACKGROUND_WHITE = "";
namespace gdcm
{
//-----------------------------------------------------------------------------
Printer::Printer():PrintStyle(Printer::VERBOSE_STYLE),F(0)
{
MaxPrintLength = 0x100; // Need to be %2
}
//-----------------------------------------------------------------------------
Printer::~Printer()
{
}
void Printer::SetColor(bool c)
{
if( c )
{
GDCM_TERMINAL_VT100_NORMAL = gdcm_terminal_vt100_normal ;
GDCM_TERMINAL_VT100_BOLD = gdcm_terminal_vt100_bold ;
GDCM_TERMINAL_VT100_UNDERLINE = gdcm_terminal_vt100_underline ;
GDCM_TERMINAL_VT100_BLINK = gdcm_terminal_vt100_blink ;
GDCM_TERMINAL_VT100_INVERSE = gdcm_terminal_vt100_inverse ;
GDCM_TERMINAL_VT100_FOREGROUND_BLACK = gdcm_terminal_vt100_foreground_black ;
GDCM_TERMINAL_VT100_FOREGROUND_RED = gdcm_terminal_vt100_foreground_red ;
GDCM_TERMINAL_VT100_FOREGROUND_GREEN = gdcm_terminal_vt100_foreground_green ;
GDCM_TERMINAL_VT100_FOREGROUND_YELLOW = gdcm_terminal_vt100_foreground_yellow ;
GDCM_TERMINAL_VT100_FOREGROUND_BLUE = gdcm_terminal_vt100_foreground_blue ;
GDCM_TERMINAL_VT100_FOREGROUND_MAGENTA = gdcm_terminal_vt100_foreground_magenta ;
GDCM_TERMINAL_VT100_FOREGROUND_CYAN = gdcm_terminal_vt100_foreground_cyan ;
GDCM_TERMINAL_VT100_FOREGROUND_WHITE = gdcm_terminal_vt100_foreground_white ;
GDCM_TERMINAL_VT100_BACKGROUND_BLACK = gdcm_terminal_vt100_background_black ;
GDCM_TERMINAL_VT100_BACKGROUND_RED = gdcm_terminal_vt100_background_red ;
GDCM_TERMINAL_VT100_BACKGROUND_GREEN = gdcm_terminal_vt100_background_green ;
GDCM_TERMINAL_VT100_BACKGROUND_YELLOW = gdcm_terminal_vt100_background_yellow ;
GDCM_TERMINAL_VT100_BACKGROUND_BLUE = gdcm_terminal_vt100_background_blue ;
GDCM_TERMINAL_VT100_BACKGROUND_MAGENTA = gdcm_terminal_vt100_background_magenta ;
GDCM_TERMINAL_VT100_BACKGROUND_CYAN = gdcm_terminal_vt100_background_cyan ;
GDCM_TERMINAL_VT100_BACKGROUND_WHITE = gdcm_terminal_vt100_background_white ;
}
else
{
GDCM_TERMINAL_VT100_NORMAL = "";
GDCM_TERMINAL_VT100_BOLD = "";
GDCM_TERMINAL_VT100_UNDERLINE = "";
GDCM_TERMINAL_VT100_BLINK = "";
GDCM_TERMINAL_VT100_INVERSE = "";
GDCM_TERMINAL_VT100_FOREGROUND_BLACK = "";
GDCM_TERMINAL_VT100_FOREGROUND_RED = "";
GDCM_TERMINAL_VT100_FOREGROUND_GREEN = "";
GDCM_TERMINAL_VT100_FOREGROUND_YELLOW = "";
GDCM_TERMINAL_VT100_FOREGROUND_BLUE = "";
GDCM_TERMINAL_VT100_FOREGROUND_MAGENTA = "";
GDCM_TERMINAL_VT100_FOREGROUND_CYAN = "";
GDCM_TERMINAL_VT100_FOREGROUND_WHITE = "";
GDCM_TERMINAL_VT100_BACKGROUND_BLACK = "";
GDCM_TERMINAL_VT100_BACKGROUND_RED = "";
GDCM_TERMINAL_VT100_BACKGROUND_GREEN = "";
GDCM_TERMINAL_VT100_BACKGROUND_YELLOW = "";
GDCM_TERMINAL_VT100_BACKGROUND_BLUE = "";
GDCM_TERMINAL_VT100_BACKGROUND_MAGENTA = "";
GDCM_TERMINAL_VT100_BACKGROUND_CYAN = "";
GDCM_TERMINAL_VT100_BACKGROUND_WHITE = "";
}
}
void PrintValue(VR::VRType const &vr, VM const &vm, const Value &v);
template <typename T>
inline char *bswap(char *out, const char *in, size_t length)
{
assert( !(length % sizeof(T)) );
assert( out != in );
for(size_t i = 0; i < length; i+=2)
{
//const char copy = in[i];
out[i] = in[i+1];
out[i+1] = in[i];
}
return out;
}
//-----------------------------------------------------------------------------
/*
void Printer::PrintElement(std::ostream& os, const ImplicitDataElement &ide, DictEntry const &entry)
{
const Tag &t = _val.GetTag();
const uint32_t vl = _val.GetVL();
_os << t;
if ( printVR )
{
//_os << " (VR=" << VR::GetVRString(dictVR) << ")";
_os << " " << VR::GetVRString(dictVR) << " ";
}
//_os << "\tVL=" << std::dec << vl << "\tValueField=[";
if( _val.GetVL() )
{
// FIXME FIXME:
// value could dereference a NULL pointer in case of 0 length...
const Value& value = _val.GetValue();
if( dictVR != VR::INVALID && VR::IsBinary(dictVR) )
{
PrintValue(dictVR, vm, value);
}
else
{
_os << "[" << value << "]";
}
}
//_os << "]";
_os << "\t\t";
_os << "#" << std::setw(4) << std::setfill(' ') << std::dec << vl << ", 1 ";
}
*/
// = reinterpret_cast< const Element<VR::type, VM::VM1>& > ( array );
// os.flush();
// memcpy( (void*)(&e), array, e.GetLength() * sizeof( VRToType<VR::type>::Type) );
// bswap<VRToType<VR::type>::Type>( (char*)(&e), array, e.GetLength() * sizeof( VRToType<VR::type>::Type) );
#define PrinterTemplateSubCase1n(type,rep) \
case VM::rep: \
{Element<VR::type, VM::rep> e; \
/*assert( VM::rep == VM::VM1_n );*/ \
e.SetArray( (VRToType<VR::type>::Type *)array, length, true ); \
e.Print( os ); }\
break;
#define PrinterTemplateSubCase(type,rep) \
case VM::rep: \
{Element<VR::type, VM::rep> e; \
/*assert( bv.GetLength() == VMToLength<VM::rep>::Length * sizeof( VRToType<VR::type>::Type) ); */ \
assert( bv.GetLength() == e.GetLength() * sizeof( VRToType<VR::type>::Type) ); \
memcpy( (void*)(&e), array, e.GetLength() * sizeof( VRToType<VR::type>::Type) ); \
e.Print( os ); }\
break;
#define PrinterTemplateSub(type) \
switch(vm) { \
PrinterTemplateSubCase(type, VM1) \
PrinterTemplateSubCase(type, VM2) \
PrinterTemplateSubCase(type, VM3) \
PrinterTemplateSubCase(type, VM4) \
PrinterTemplateSubCase(type, VM5) \
PrinterTemplateSubCase(type, VM6) \
PrinterTemplateSubCase(type, VM24) \
PrinterTemplateSubCase1n(type, VM1_n) \
default: assert(0); }
#define PrinterTemplateSub2(type) \
switch(vm) { \
PrinterTemplateSubCase1n(type, VM1) \
default: assert(0); }
#define PrinterTemplateCase(type) \
case VR::type: \
PrinterTemplateSub(type) \
break;
#define PrinterTemplateCase2(type) \
case VR::type: \
PrinterTemplateSub2(type) \
break;
#define PrinterTemplate() \
switch(vr) { \
PrinterTemplateCase(AE) \
PrinterTemplateCase(AS) \
PrinterTemplateCase(AT) \
PrinterTemplateCase(CS) \
PrinterTemplateCase(DA) \
PrinterTemplateCase(DS) \
PrinterTemplateCase(DT) \
PrinterTemplateCase(FL) \
PrinterTemplateCase(FD) \
PrinterTemplateCase(IS) \
PrinterTemplateCase(LO) \
PrinterTemplateCase(LT) \
PrinterTemplateCase2(OB) \
PrinterTemplateCase(OF) \
PrinterTemplateCase2(OW) \
PrinterTemplateCase(PN) \
PrinterTemplateCase(SH) \
PrinterTemplateCase(SL) \
PrinterTemplateCase(SQ) \
PrinterTemplateCase(SS) \
PrinterTemplateCase(ST) \
PrinterTemplateCase(TM) \
PrinterTemplateCase(UI) \
PrinterTemplateCase(UL) \
PrinterTemplateCase(UN) \
PrinterTemplateCase(US) \
PrinterTemplateCase(UT) \
default: assert(0); }
void PrintValue(VR::VRType const &vr, VM const &vm, const Value &v)
{
try
{
const ByteValue &bv = dynamic_cast<const ByteValue&>(v);
const char *array = bv.GetPointer();
const VL &length = bv.GetLength();
//unsigned short val = *(unsigned short*)(array);
std::ostream &os = std::cout;
// Big phat MACRO:
PrinterTemplate()
}
catch(...)
{
// Indeed a SequenceOfFragments is not handle ...
std::cerr << "Problem in PrintValue" << std::endl;
}
}
//-----------------------------------------------------------------------------
#if 0
void Printer::PrintDataSet(std::ostream& os, const DataSet<ImplicitDataElement> &ds)
{
//ImplicitDataElement de;
Printer::PrintStyles pstyle = is.GetPrintStyle();
(void)pstyle;
bool printVR = true; //is.GetPrintVR();
std::ostream &_os = std::cout;
//static const Dicts dicts;
//const Dict &d = dicts.GetPublicDict();
static const Dict d;
static const GroupDict gd;
try
{
//while( is.Read(de) )
DataSet<ImplicitDataElement>::ConstIterator it = ds.Begin();
for( ; it != ds.End(); ++it )
{
const ImplicitDataElement &de = *it;
const Tag &t = de.GetTag();
const DictEntry &entry = d.GetDictEntry(de.GetTag());
// Use VR from dictionary
VR::VRType vr = entry.GetVR();
VM::VMType vm = entry.GetVM();
if( /*de.GetTag().GetGroup()%2 &&*/ de.GetTag().GetElement() == 0 )
{
assert( vr == VR::INVALID || vr == VR::UL );
assert( vm == VM::VM0 || vm == VM::VM1 );
vr = VR::UL;
vm = VM::VM1;
}
if( vr == VR::INVALID || VR::IsBinary(vr) || VR::IsASCII( vr ) )
{
// TODO: FIXME FIXME FIXME
if ( de.GetTag().GetElement() == 0x0 )
{
if( vr == VR::INVALID ) // not found
{
vr = VR::UL; // this is a group length (VR=UL,VM=1)
}
}
if( vr == VR::INVALID && entry.GetVR() != VR::INVALID )
{
vr = entry.GetVR();
}
// TODO FIXME FIXME FIXME
// Data Element (7FE0,0010) Pixel Data has the Value Representation
// OW and shall be encoded in Little Endian.
//VM::VMType vm = VM::VM1;
if( t == Tag(0x7fe0,0x0010) )
{
assert( vr == VR::OB_OW );
vr = VR::OW;
//vm = VM::VM1_n;
}
// RETIRED:
// See PS 3.5 - 2004
// Data Element (50xx,3000) Curve Data has the Value Representation OB
// with its component points (n-tuples) having the Value Representation
// specified in Data Value Representation (50xx,0103).
// The component points shall be encoded in Little Endian.
else if( t == Tag(0x5004,0x3000) ) // FIXME
{
assert( vr == VR::OB_OW );
vr = VR::OB;
}
// Value of pixels not present in the native image added to an image
// to pad to rectangular format. See C.7.5.1.1.2 for further explanation.
// Note: The Value Representation of this Attribute is determined
// by the value of Pixel Representation (0028,0103).
if( vr == VR::US_SS )
{
if( t == Tag(0x0028,0x0120) // Pixel Padding Value
|| t == Tag(0x0028,0x0106) // Smallest Image Pixel Value
|| t == Tag(0x0028,0x0107) // Largest Image Pixel Value
|| t == Tag(0x0028,0x0108) // Smallest Pixel Value in Series
|| t == Tag(0x0028,0x0109) // Largest Pixel Value in Series
|| t == Tag(0x0028,0x1101) // Red Palette Color Lookup Table Descriptor
|| t == Tag(0x0028,0x1102) // Green Palette Color Lookup Table Descriptor
|| t == Tag(0x0028,0x1103) // Blue Palette Color Lookup Table Descriptor
)
{
// TODO It would be nice to have a TagToVR<0x0028,0x0103>::VRType
// and TagToVM<0x0028,0x0103>::VMType ...
// to be able to have an independant Standard from implementation :)
const ImplicitDataElement &pixel_rep =
ds.GetDataElement( Tag(0x0028, 0x0103) );
const Value &value = pixel_rep.GetValue();
const ByteValue &bv = static_cast<const ByteValue&>(value);
// FIXME:
unsigned short pixel_rep_value = *(unsigned short*)(bv.GetPointer());
assert( pixel_rep_value == 0x0 || pixel_rep_value == 0x1 );
vr = pixel_rep_value ? VR::SS : VR::US;
}
else
{
assert(0);
}
}
PrintImplicitDataElement(_os, de, printVR, vr /*entry.GetVR()*/, vm);
}
else
{
assert(0);
const Value& val = de.GetValue();
_os << de.GetTag();
if ( printVR )
{
//_os << " ?VR=" << vr;
_os << " " << vr;
}
//_os << "\tVL=" << std::dec << de.GetVL() << "\tValueField=[";
_os << "\t" << std::dec << de.GetVL() << "\tValueField=[";
// Use super class of the template stuff
//Attribute af;
//// Last minute check, is it a Group Length:
//af.SetVR(vr);
//af.SetVM(vm);
//af.SetLength( val.GetLength() );
//std::istringstream iss;
//iss.str( std::string( val.GetPointer(), val.GetLength() ) );
//af.Read( iss );
//af.Print( _os );
_os << "]";
}
if( de.GetTag().GetElement() == 0x0 )
{
_os << "\t\t" << gd.GetName(de.GetTag().GetGroup() )
<< " " << entry.GetName() << std::endl;
}
else
{
// _os.flush();
// std::streampos pos = _os.tellp();
// streambuf *s = _os.rdbuf();
//int pos = _os.str().size();
_os << " " << entry.GetName() << std::endl;
}
}
}
catch(std::exception &e)
{
std::cerr << "Exception:" << typeid(e).name() << std::endl;
}
}
#endif
// TODO / FIXME
// SIEMENS_GBS_III-16-ACR_NEMA_1.acr is a tough kid: 0009,1131 is supposed to be VR::UL, but
// there are only two bytes...
#define StringFilterCase(type) \
case VR::type: \
{ \
Element<VR::type,VM::VM1_n> el; \
if( !de.IsEmpty() ) { \
el.Set( de.GetValue() ); \
if( el.GetLength() ) { \
os << "" << el.GetValue(); \
long l = std::min( (long) el.GetLength(), (long) (MaxPrintLength / VR::GetLength(VR::type)) ); \
for(long i = 1; i < l; ++i) os << "\\" << el.GetValue((unsigned int)i); \
os << ""; } \
else { if( de.IsEmpty() ) os << GDCM_TERMINAL_VT100_INVERSE << "(no value)" << GDCM_TERMINAL_VT100_NORMAL; \
else os << GDCM_TERMINAL_VT100_INVERSE << GDCM_TERMINAL_VT100_FOREGROUND_RED << "(VR=" << refvr << " is incompatible with length)" << GDCM_TERMINAL_VT100_NORMAL; } } \
else { assert( de.IsEmpty()); os << GDCM_TERMINAL_VT100_INVERSE << "(no value)" << GDCM_TERMINAL_VT100_NORMAL; } \
} break
VR Printer::PrintDataElement(std::ostringstream &os, const Dicts &dicts, const DataSet & ds,
const DataElement &de, std::ostream &out, std::string const & indent )
{
const ByteValue *bv = de.GetByteValue();
const SequenceOfItems *sqi = 0; //de.GetSequenceOfItems();
const Value &value = de.GetValue();
const SequenceOfFragments *sqf = de.GetSequenceOfFragments();
std::string strowner;
const char *owner = 0;
const Tag& t = de.GetTag();
if( t.IsPrivate() && !t.IsPrivateCreator() )
{
strowner = ds.GetPrivateCreator(t);
owner = strowner.c_str();
}
const DictEntry &entry = dicts.GetDictEntry(t,owner);
const VR &vr = entry.GetVR();
const VM &vm = entry.GetVM();
const char *name = entry.GetName();
bool retired = entry.GetRetired();
//if( t.IsPrivate() ) assert( retired == false );
const VR &vr_read = de.GetVR();
const VL &vl_read = de.GetVL();
os << indent; // first thing do the shift !
os << t << " ";
os << vr_read << " ";
//VR refvr = GetRefVR(dicts, de);
VR refvr;
// always prefer the vr from the file:
if( vr_read == VR::INVALID )
{
refvr = vr;
}
else if ( vr_read == VR::UN && vr != VR::INVALID ) // File is explicit, but still prefer vr from dict when UN
{
refvr = vr;
}
else // cool the file is Explicit !
{
refvr = vr_read;
}
if( refvr.IsDual() ) // This mean vr was read from a dict entry:
{
refvr = DataSetHelper::ComputeVR(*F,ds, t);
}
assert( refvr != VR::US_SS );
assert( refvr != VR::OB_OW );
if( dynamic_cast<const SequenceOfItems*>( &value ) )
{
sqi = de.GetValueAsSQ();
refvr = VR::SQ;
assert( refvr == VR::SQ );
}
#if 0
else if( vr == VR::SQ && vr_read != VR::SQ )
{
sqi = de.GetValueAsSQ();
refvr = VR::SQ;
assert( refvr == VR::SQ );
}
#endif
if( (vr_read == VR::INVALID || vr_read == VR::UN ) && vl_read.IsUndefined() )
{
assert( refvr == VR::SQ );
}
// if( vr_read == VR::SQ || vr_read == VR::UN )
// {
// sqi = de.GetValueAsSQ();
// }
if( vr != VR::INVALID && (!vr.Compatible( vr_read ) || vr_read == VR::INVALID || vr_read == VR::UN ) )
{
assert( vr != VR::INVALID );
// FIXME : if terminal supports it: print in red/green !
os << GDCM_TERMINAL_VT100_FOREGROUND_GREEN;
if( vr == VR::US_SS || vr == VR::OB_OW )
{
os << "(" << vr << " => " << refvr << ") ";
}
else
{
os << "(" << vr << ") ";
}
os << GDCM_TERMINAL_VT100_NORMAL;
}
else if( sqi /*de.GetSequenceOfItems()*/ && refvr == VR::INVALID )
{
// when vr == VR::INVALID and vr_read is also VR::INVALID, we have a seldom case where we can guess
// the vr
// eg. CD1/647662/647663/6471066 has a SQ at (2001,9000)
os << GDCM_TERMINAL_VT100_FOREGROUND_GREEN;
os << "(SQ) ";
os << GDCM_TERMINAL_VT100_NORMAL;
assert( refvr == VR::INVALID );
refvr = VR::SQ;
}
// Print Value now:
if( refvr & VR::VRASCII )
{
assert( !sqi && !sqf );
if( bv )
{
VL l = std::min( bv->GetLength(), MaxPrintLength );
os << "[";
if( bv->IsPrintable(l) )
{
bv->PrintASCII(os,l);
}
else
{
os << GDCM_TERMINAL_VT100_INVERSE;
os << GDCM_TERMINAL_VT100_FOREGROUND_RED;
bv->PrintASCII(os,l);
os << GDCM_TERMINAL_VT100_NORMAL;
}
os << "]";
}
else
{
assert( de.IsEmpty() );
os << GDCM_TERMINAL_VT100_INVERSE;
os << "(no value)";
os << GDCM_TERMINAL_VT100_NORMAL;
}
}
else
{
assert( refvr & VR::VRBINARY || (vr == VR::INVALID && refvr == VR::INVALID) );
//std::ostringstream os;
std::string s;
switch(refvr)
{
StringFilterCase(AT);
StringFilterCase(FL);
StringFilterCase(FD);
//StringFilterCase(OB);
StringFilterCase(OF);
//StringFilterCase(OW);
StringFilterCase(SL);
//StringFilterCase(SQ);
StringFilterCase(SS);
StringFilterCase(UL);
//StringFilterCase(UN);
StringFilterCase(US);
//StringFilterCase(UT);
case VR::OB:
case VR::OW:
case VR::OB_OW:
case VR::UN:
case VR::US_SS_OW: // TODO: check with ModalityLUT.dcm
/*
VR::US_SS_OW:
undefined_length_un_vr.dcm
GDCMFakeJPEG.dcm
PhilipsWith15Overlays.dcm
*/
{
if ( bv )
{
//VL l = std::min( bv->GetLength(), MaxPrintLength );
//VL l = std::min( (int)bv->GetLength(), 0xF );
//int width = (vr == VR::OW ? 4 : 2);
//os << std::hex << std::setw( width ) << std::setfill('0');
bv->PrintHex(os, MaxPrintLength / 4);
//os << std::dec;
}
else if ( sqf )
{
assert( t == Tag(0x7fe0,0x0010) );
//os << *sqf;
}
else if ( sqi )
{
// gdcmDataExtra/gdcmSampleData/images_of_interest/illegal_UN_stands_for_SQ.dcm
gdcmErrorMacro( "Should not happen: VR=UN but contains a SQ" );
//os << *sqi;
}
else
{
assert( !sqi && !sqf );
assert( de.IsEmpty() );
os << GDCM_TERMINAL_VT100_INVERSE << "(no value)" << GDCM_TERMINAL_VT100_NORMAL;
}
}
break;
case VR::US_SS:
// impossible...
assert( refvr != VR::US_SS );
break;
case VR::SQ:
if( !sqi /*!de.GetSequenceOfItems()*/ && !de.IsEmpty() && de.GetValue().GetLength() )
{
// This case is insane, this is an implicit file, with a defined length SQ.
// Since this is a private element there is no way to guess that, and to
// make it even worse the binary blob does not start with item start...
// Bug_Philips_ItemTag_3F3F.dcm
//os << GDCM_TERMINAL_VT100_BACKGROUND_RED;
//bv->PrintHex(os, MaxPrintLength / 4);
//os << GDCM_TERMINAL_VT100_NORMAL;
}
else
{
if( vl_read.IsUndefined() )
{
os << "(Sequence with undefined length)";
}
else
{
os << "(Sequence with defined length)";
}
}
break;
// Let's be a little more helpful and try to print anyway when possible:
case VR::INVALID:
{
if( bv )
{
VL l = std::min( bv->GetLength(), MaxPrintLength );
if( bv->IsPrintable(l) )
{
os << "[";
bv->PrintASCII(os,l);
os << "]";
}
else if( t == Tag(0xfffe,0xe000) ) bv->PrintHex(os, MaxPrintLength / 8);
else
{
os << GDCM_TERMINAL_VT100_INVERSE;
// << "(non-printable character found)"
bv->PrintHex(os, MaxPrintLength / 8);
os << GDCM_TERMINAL_VT100_NORMAL;
}
}
else
{
assert( !sqi && !sqf );
assert( de.IsEmpty() );
os << GDCM_TERMINAL_VT100_INVERSE << "(no value)" << GDCM_TERMINAL_VT100_NORMAL;
}
}
break;
default:
assert(0);
break;
}
os << s;
}
out.width(57);
out << std::left << os.str();
// There is something wrong going on when doing terminal color stuff
// Let's add a couple of space to be nicer...
if( os.str().find( GDCM_TERMINAL_VT100_NORMAL ) != std::string::npos )
{
out << " ";
}
os.str( "" );
// Extra info (not in the file)
os << " # ";
// Append the VL
if( vl_read.IsUndefined() )
{
os << "u/l";
}
else
{
os << std::dec << vl_read;
}
if( vl_read.IsOdd() )
{
os << GDCM_TERMINAL_VT100_FOREGROUND_GREEN;
os << " (" << (vl_read + 1) << ")";
os << GDCM_TERMINAL_VT100_NORMAL;
}
os << ",";
// Append the VM
if( vm != VM::VM0 )
{
os << vm;
}
else
{
os << GDCM_TERMINAL_VT100_FOREGROUND_RED;
os << "?";
os << GDCM_TERMINAL_VT100_NORMAL;
}
VM guessvm = VM::VM0;
if( refvr & VR::VRASCII )
{
assert( refvr != VR::INVALID );
assert( refvr & VR::VRASCII );
if( bv )
{
unsigned int count = VM::GetNumberOfElementsFromArray(bv->GetPointer(), bv->GetLength());
guessvm = VM::GetVMTypeFromLength(count, 1); // hackish...
}
}
else if( refvr & VR::VRBINARY )
{
assert( refvr != VR::INVALID );
assert( refvr & VR::VRBINARY );
if( refvr & VR::OB_OW || refvr == VR::SQ )
{
guessvm = VM::VM1;
}
else if ( refvr == VR::UN && sqi )
{
// This is a SQ / UN
guessvm = VM::VM1;
}
else if( bv )
{
guessvm = VM::GetVMTypeFromLength(bv->GetLength(), refvr.GetSize() );
}
else
{
if( de.IsEmpty() ) guessvm = VM::VM0;
else assert( 0 && "Impossible" );
}
}
else if( refvr == VR::INVALID )
{
refvr = VR::UN;
guessvm = VM::VM1;
}
else
{
// Burst into flames !
assert( 0 && "Impossible happen" );
}
if( !vm.Compatible( guessvm ) )
{
os << GDCM_TERMINAL_VT100_FOREGROUND_RED;
os << " (" << guessvm << ") ";
os << GDCM_TERMINAL_VT100_NORMAL;
}
// Append the name now:
if( name && *name )
{
// No owner case !
if( t.IsPrivate() && (owner == 0 || *owner == 0 ) && !t.IsPrivateCreator() )
{
os << GDCM_TERMINAL_VT100_FOREGROUND_RED;
os << " " << name;
os << GDCM_TERMINAL_VT100_NORMAL;
}
// retired element
else if( retired )
{
assert( t.IsPublic() || t.GetElement() == 0x0 ); // Is there such thing as private and retired element ?
os << " " << GDCM_TERMINAL_VT100_FOREGROUND_RED << GDCM_TERMINAL_VT100_UNDERLINE;
os << name;
os << GDCM_TERMINAL_VT100_NORMAL;
os << GDCM_TERMINAL_VT100_NORMAL;
}
else
{
os << GDCM_TERMINAL_VT100_BOLD;
os << " " << name;
os << GDCM_TERMINAL_VT100_NORMAL;
}
}
else
{
os << GDCM_TERMINAL_VT100_FOREGROUND_RED;
if( t.IsPublic() )
{
// What ? A public element that we do not know about !!!
os << GDCM_TERMINAL_VT100_BLINK;
}
os << " GDCM:UNKNOWN"; // Special keyword
os << GDCM_TERMINAL_VT100_NORMAL;
}
os << "\n";
return refvr;
}
void Printer::PrintSQ(const SequenceOfItems *sqi, std::ostream & os, std::string const & indent)
{
if( !sqi ) return;
SequenceOfItems::ItemVector::const_iterator it = sqi->Items.begin();
for(; it != sqi->Items.end(); ++it)
{
const Item &item = *it;
const DataSet &ds = item.GetNestedDataSet();
const DataElement &deitem = item;
std::string nextindent = indent + " ";
os << nextindent << deitem.GetTag();
os << " ";
os << "na"; //deitem.GetVR();
os << " ";
if( deitem.GetVL().IsUndefined() )
{
os << "(Item with undefined length)";
}
else
{
os << "(Item with defined length)";
}
os << "\n";
PrintDataSet(ds, os, nextindent + " ");
if( deitem.GetVL().IsUndefined() )
{
const Tag itemDelItem(0xfffe,0xe00d);
os << nextindent << itemDelItem << "\n";
}
}
if( sqi->GetLength().IsUndefined() )
{
const Tag seqDelItem(0xfffe,0xe0dd);
os << indent << seqDelItem << "\n";
}
}
void Printer::PrintDataSet(const DataSet &ds, std::ostream &out, std::string const & indent )
{
const Global& g = GlobalInstance;
const Dicts &dicts = g.GetDicts();
const Dict &d = dicts.GetPublicDict(); (void)d;
DataSet::ConstIterator it = ds.Begin();
for( ; it != ds.End(); ++it )
{
const DataElement &de = *it;
//const ByteValue *bv = de.GetByteValue();
const SequenceOfFragments *sqf = de.GetSequenceOfFragments();
std::ostringstream os;
VR refvr = PrintDataElement(os, dicts, ds, de, out, indent);
if( refvr == VR::SQ /*|| sqi*/ )
{
//SmartPointer<SequenceOfItems> sqi2 = DataSetHelper::ComputeSQFromByteValue( *F, ds, de.GetTag() );
SmartPointer<SequenceOfItems> sqi2 = de.GetValueAsSQ();
PrintSQ(sqi2, os, indent);
/*
const SequenceOfItems *sqi = de.GetSequenceOfItems();
if( sqi ) // empty SQ ?
{
assert( sqi );
PrintSQ(sqi, os, indent);
}
else
{
if( !de.IsEmpty() )
{
// Ok so far we know:
// 1. VR is SQ sqi == NULL
// 2. DataElement is not empty ...
// => This is a VR:UN or Implicit SQ with defined length.
// let's try to interpret this sequence
SequenceOfItems *sqi2 = DataSetHelper::ComputeSQFromByteValue( *F, ds, de.GetTag() );
if(sqi2) PrintSQ(sqi2, os, indent);
delete sqi2;
}
}
*/
}
else if ( sqf )
{
std::string nextindent = indent + " ";
const BasicOffsetTable & table = sqf->GetTable();
//os << nextindent << table.GetTag() << "\n";
PrintDataElement(os,dicts,ds,table,out,nextindent);
size_t numfrag = sqf->GetNumberOfFragments();
for(size_t i = 0; i < numfrag; ++i)
{
const Fragment& frag = sqf->GetFragment(i);
//os << nextindent<< frag << "\n";
PrintDataElement(os,dicts,ds,frag,out,nextindent);
}
const Tag seqDelItem(0xfffe,0xe0dd);
VL zero = 0;
os << /*nextindent <<*/ seqDelItem;
os << " " << zero << "\n";
}
else
{
// This is a byte value, so it should have been already treated
}
out << os.str();
}
}
//-----------------------------------------------------------------------------
void DumpDataSet(const DataSet &ds, std::ostream &os )
{
DataSet::ConstIterator it = ds.Begin();
for( ; it != ds.End(); ++it )
{
const DataElement &de = *it;
const Tag& t = de.GetTag(); (void)t;
const VR& vr = de.GetVR(); (void)vr;
os << de << std::endl;
//if( VR::IsASCII( vr ) )
// {
// }
}
}
//-----------------------------------------------------------------------------
void Printer::Print(std::ostream& os)
{
os << "# Dicom-File-Format\n";
os << "\n";
os << "# Dicom-Meta-Information-Header\n";
os << "# Used TransferSyntax: \n";
const FileMetaInformation &meta = F->GetHeader();
if( PrintStyle == VERBOSE_STYLE )
PrintDataSet(meta, os);
else if (PrintStyle == CONDENSED_STYLE )
DumpDataSet(meta, os);
os << "\n# Dicom-Data-Set\n";
os << "# Used TransferSyntax: ";
const TransferSyntax &metats = meta.GetDataSetTransferSyntax();
os << metats;
os << std::endl;
const DataSet &ds = F->GetDataSet();
if( PrintStyle == VERBOSE_STYLE )
PrintDataSet(ds, os);
else if (PrintStyle == CONDENSED_STYLE )
DumpDataSet(ds, os);
}
}
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