1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
|
/*=========================================================================
Program: GDCM (Grassroots DICOM). A DICOM library
Copyright (c) 2006-2011 Mathieu Malaterre
All rights reserved.
See Copyright.txt or http://gdcm.sourceforge.net/Copyright.html for details.
This software is distributed WITHOUT ANY WARRANTY; without even
the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
PURPOSE. See the above copyright notice for more information.
=========================================================================*/
#include "gdcmFileAnonymizer.h"
#include "gdcmTesting.h"
#include "gdcmSystem.h"
#include "gdcmReader.h"
#include "gdcmFilename.h"
static int TestFileAnonymize2(const char *filename, bool verbose = false)
{
using namespace gdcm;
if( verbose )
std::cout << "Processing: " << filename << std::endl;
// Create directory first:
const char subdir[] = "TestFileAnonymize2";
std::string tmpdir = Testing::GetTempDirectory( subdir );
if( !System::FileIsDirectory( tmpdir.c_str() ) )
{
System::MakeDirectory( tmpdir.c_str() );
//return 1;
}
std::string outfilename = Testing::GetTempFilename( filename, subdir );
const gdcm::Tag t1(0x0018,0x5100);
const gdcm::Tag t2(0x0018,0x1312);
const gdcm::Tag t3(0x0018,0x1313);
const gdcm::Tag t4(0x0018,0x1317);
const gdcm::Tag t5(0x0008,0x2112);
const gdcm::Tag t6(0x0008,0x9215);
const gdcm::Tag t7(0x0018,0x1020);
const gdcm::Tag t8(0x0004,0x1130); // Test DICOMDIR !
const gdcm::Tag t9(0x0008,0x0000); // Earliest possible Data Element
const gdcm::Tag t0(0xffff,0xffff); // Latest Possible Element
std::vector<gdcm::Tag> tags;
tags.push_back( t0 );
tags.push_back( t1 );
tags.push_back( t2 );
tags.push_back( t3 );
tags.push_back( t4 );
tags.push_back( t5 );
tags.push_back( t6 );
tags.push_back( t7 );
tags.push_back( t8 );
tags.push_back( t9 );
// precondition, remove the file if present:
System::RemoveFile(outfilename.c_str());
gdcm::FileAnonymizer fa;
fa.SetInputFileName( filename );
fa.SetOutputFileName( outfilename.c_str() );
for( std::vector<gdcm::Tag>::const_iterator it = tags.begin();
it != tags.end(); ++it )
{
fa.Empty( *it );
}
if( !fa.Write() )
{
std::cerr << "Failed to write: " << outfilename << std::endl;
return 1;
}
// Read back and check:
gdcm::Reader r;
r.SetFileName( outfilename.c_str() );
if( !r.Read() )
{
gdcm::Filename fn( filename );
std::cerr << "Failed to read: " << outfilename << std::endl;
if( strcmp(fn.GetName(), "SIEMENS_MAGNETOM-12-MONO2-GDCM12-VRUN.dcm") == 0
|| strcmp(fn.GetName(), "DMCPACS_ExplicitImplicit_BogusIOP.dcm") == 0
|| strcmp(fn.GetName(), "ExplicitVRforPublicElementsImplicitVRforShadowElements.dcm") == 0 )
{
return 0;
}
return 1;
}
const File &f = r.GetFile();
gdcm::MediaStorage ms;
ms.SetFromFile( f );
const DataSet &ds = f.GetDataSet();
for( std::vector<gdcm::Tag>::const_iterator it = tags.begin();
it != tags.end(); ++it )
{
const gdcm::Tag & t = *it;
// Special handling of t8 (DICOMDIR only)
const bool iserror = (ms == gdcm::MediaStorage::MediaStorageDirectoryStorage && t == t8) && false; // de-activate for now
if( !ds.FindDataElement( t ) )
{
if( iserror )
{
std::cerr << "Not found element: " << t << " in " << outfilename << std::endl;
return 1;
}
}
const gdcm::DataElement & de = ds.GetDataElement( t );
if( de.GetVL() != 0 )
{
if( iserror )
{
std::cerr << "Wrong VL for: " << t << " in " << outfilename << std::endl;
return 1;
}
}
}
return 0;
}
int TestFileAnonymizer2(int argc, char *argv[])
{
if( argc == 2 )
{
const char *filename = argv[1];
return TestFileAnonymize2(filename, true);
}
// else
gdcm::Trace::DebugOff();
gdcm::Trace::WarningOff();
gdcm::Trace::ErrorOff();
int r = 0, i = 0;
const char *filename;
const char * const *filenames = gdcm::Testing::GetFileNames();
while( (filename = filenames[i]) )
{
r += TestFileAnonymize2( filename );
++i;
}
return r;
}
|
