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//genesis
echo creating pyramidal cells
/*
** create the pyramidal population element on the root
*/
create neutral /pyr
// ==========================================================
// PYRAMIDAL CELL ARRAY
// ==========================================================
pyramidal_cell /pyramidal {ACTIVE} {MULTI} {SPIKE} {CONNECT} \
{PYR_SOMA_D} {PYR_SOMA_L} {PYR_DEND_D} {PYR_DEND_L}
createmap /pyramidal /pyr {PYR_NX} {PYR_NY} -delta {PYR_DX} {PYR_DY}
delete /pyramidal
position /pyr I I 350e-3
// ==========================================================
// PYRAMIDAL CELL THRESHOLDS
// ==========================================================
if ({ACTIVE})
setrandfield /pyr/pyramidal[]/HH_Na_channel X_alpha_V0 -gaussian -40 \
3
else
setrandfield /pyr/pyramidal[]/spike thresh -gaussian -40 3
end
if ({T_NOISE})
// ==========================================================
// TRANSMITTER NOISE
// ==========================================================
create funcgen /pyr/Affnoise
setfield ^ mode 3 amplitude 1 x {1000*{getclock 0}}
addmsg ^ /pyr/pyramidal[]/soma/Ia_dend/Aff_Na_channel \
RAND_ACTIVATION output x
create funcgen /pyr/ffnoise
setfield ^ mode 3 amplitude .2 x {100*{getclock 0}}
// prob amplitude
addmsg ^ /pyr/pyramidal[]/soma/Ia_dend/K_channel RAND_ACTIVATION \
output x
end
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