1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88
|
// genesis
/**********************************************************************
**
** DO NOT EDIT THIS FILE IN THE neurokit DIRECTORY!
**
** Make a copy of this file in every directory that contains .p
** files and edit the copies, in order to customize neurokit for
** different simulations. When you run neurokit from other
** directories, the simulator will look for the local version of
** userprefs.g, and if it cannot find it there will look for the
** default in the neurokit directory. This version of userprefs is
** set up to run the Coarse Asymmetric Mitral cell demo.
**
** There are three aspects to customisation :
**
** 1 Include the appropriate script files from the /neuron/prototype
** directory and from wherever you have defined new prototype
** elements.
**
** 2 Invoke the functions that make the prototypes you want for
** your simulation.
**
** 3 Put your preferences for the user_variables defined in
** defaults.g in the copies of this file.
**
**********************************************************************/
echo Using local user preferences
/**********************************************************************
**
** 1 Including script files for prototype functions
**
**********************************************************************/
/* file for standard compartments */
include compartments
/* file for Fox, Nowycky and Tsien's channels */
include FNTchan.g
/**********************************************************************
**
** 2 Invoking functions to make prototypes in the /library element
**
**********************************************************************/
/* To ensure that all subsequent elements are made in the library */
ce /library
/* These make the standard types of compartments that can be
** invoked in .p files */
make_cylind_compartment /* makes "compartment" */
make_sphere_compartment /* makes "compartment_sphere" */
make_cylind_symcompartment /* makes "symcompartment" */
make_sphere_symcompartment /* makes "symcompartment_sphere" */
/* Making Ca channel */
make_NCa_drg_fnt
/* returning to the root element */
ce /
/**********************************************************************
**
** 3 Setting preferences for user-variables.
**
**********************************************************************/
/* See defaults.g for default values of these */
user_cell = "/soma"
user_pfile = "soma.p"
user_name = "Upinder S. Bhalla"
user_inject = 0.01
user_ymin1 = -8.0e-11
user_ymax1 = 8.0e-11
user_xmax1 = 0.15
user_xmax2 = 0.15
user_field1 = "Ik"
user_path1 = "NCa_drg_fnt"
user_numxouts = 2
user_yoffset1 = 0.0
user_yoffset2 = 0.0
|