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Source: genomethreader
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Sascha Steinbiss <satta@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13),
genometools,
libgenometools0-dev,
libvmatch-dev,
zlib1g-dev,
libbz2-dev,
libexpat1-dev,
liblua5.1-0-dev,
libtre-dev,
asciidoctor
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/genomethreader
Vcs-Git: https://salsa.debian.org/med-team/genomethreader.git
Homepage: https://genomethreader.org
Rules-Requires-Root: no
Package: genomethreader
Architecture: any
Depends: ${shlibs:Depends},
${misc:Depends}
Built-Using: vmatch (= ${libvmatch-dev:Version})
Description: software tool to compute gene structure predictions
GenomeThreader is a software tool to compute gene structure predictions.
The gene structure predictions are calculated using a similarity-based
approach where additional cDNA/EST and/or protein sequences are used to
predict gene structures via spliced alignments. GenomeThreader was motivated
by disabling limitations in GeneSeqer, a popular gene prediction program
which is widely used for plant genome annotation.
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