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\begin{table}
\begin{center}
\begin{tabular}{|r|l|l|l|c|c|c|}
\hline
\# & Species & Filename & Class & GT & GC & AG\\
\hline
\hline
1 & \textit{Homo sapiens} & \texttt{human} & 2
& $\surd$ & $-$ & $\surd$ \\
\hline
2 & \textit{Mus musculus} & \texttt{mouse} & 2
& $\surd$ & $-$ & $\surd$ \\
\hline
3 & \textit{Rattus norvegicus} & \texttt{rat} & 7
& $\surd$ & $-$ & $\surd$ \\
\hline
4 & \textit{Gallus gallus} & \texttt{chicken} & 7
& $\surd$ & $-$ & $\surd$ \\
\hline
5 & \textit{Drosophila} & \texttt{drosophila} & 7
& $\surd$ & $-$ & $\surd$ \\
\hline
6 & \textit{Caenorhabditis elegans} & \texttt{nematode} & 7
& $\surd$ & $-$ & $\surd$ \\
\hline
7 & \textit{Schizosaccharomyces pombe} & \texttt{fission\_yeast} & 7
& $\surd$ & $-$ & $\surd$ \\
\hline
8 & \textit{Aspergillus} & \texttt{aspergillus} & 7
& $\surd$ & $-$ & $\surd$ \\
\hline
9 & \textit{Arabidopsis thaliana} & \texttt{arabidopsis} & 7
& $\surd$ & $\surd$ & $\surd$ \\
\hline
10 & \textit{Zea mays} & \texttt{maize} & 7
& $\surd$ & $\surd$ & $\surd$ \\
\hline
11 & \textit{Medicago truncatula} & \texttt{medicago} & 7
& $\surd$ & $-$ & $\surd$ \\
\hline
12 & \textit{Oryza sativa} & \texttt{rice} & 7
& $\surd$ & $\surd$ & $\surd$ \\
\hline
\end{tabular}
\caption[Available BSSM parameter files]{Available BSSM parameter files: \Gth
comes with BSSM parameter files for twelve different species. All parameter files have the extension
\texttt{.bssm}. \textit{Class} denotes the Bayesian classification model:
Either a Bayesian two classification model or a Bayesian seven
classification model was used for calculation of the parameter (as described in \cite{BRE:XIN:ZHU:2004}). A $\surd$ in the GT, GC, and AG columns means that the corresponding BSSM file contains a model for GT donor, GC donor, or AG acceptor sites, respectively.}
\label{speciestable}
\end{center}
\end{table}
|
