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This directory contains the binary distribution of GenomeThreader (gth).
It contains the following directories
bin/ contains the binary files and shell scripts
data/ contains some example data
doc/ contains the manual
To be able to work with GenomeThreader include bin/ in your path
and set the following environment variables (also explained in the
manual in doc/), e.g.:
setenv $BSSMDIR "${HOME}/gth/bin/bssm"
and
setenv $GTHDATADIR "${HOME}/gth/bin/gthdata"
If you have problems with file locking via NFS (for example you get an error
message like this: cannot flock: No locks available), then you can disable file
locking by setting the environment variable GTHNOFLOCK to any value.
For example, GTHNOFLOCK=yes
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