File: testspec_fi.lua

package info (click to toggle)
genometools 1.5.9%2Bds-4
  • links: PTS, VCS
  • area: main
  • in suites: stretch
  • size: 52,392 kB
  • ctags: 29,663
  • sloc: ansic: 346,757; ruby: 28,351; python: 4,880; sh: 3,135; makefile: 1,186; perl: 219; haskell: 37; sed: 5
file content (11 lines) | stat: -rw-r--r-- 372 bytes parent folder | download | duplicates (9)
1
2
3
4
5
6
7
8
9
10
11
rm = gt.region_mapping_new_seqfile("LmjF_v6.1_all_20131105.fa")

derives_from = {}

describe.feature("gene", function(gene)
  it("does not overlap an unrelated feature", function()
    fs = featureidx:get_features_for_range(gene:get_seqid(), gene:get_range())
    -- expect the gene and the polypeptide in this region
    expect(#fs).should_be_smaller_than(3)
  end)
end)