File: comparesfx.sh

package info (click to toggle)
genometools 1.6.1%2Bds-3
  • links: PTS, VCS
  • area: main
  • in suites: bullseye
  • size: 50,412 kB
  • sloc: ansic: 271,241; ruby: 30,339; python: 4,880; sh: 3,193; makefile: 1,194; perl: 219; pascal: 159; haskell: 37; sed: 5
file content (9 lines) | stat: -rwxr-xr-x 251 bytes parent folder | download | duplicates (9) 
1
2
3
4
5
6
7
8
9
 
#!/bin/sh

for filename in `scripts/enumseqfiles.sh`
do
  # echo "${filename}"
  bin/gt suffixerator -db ${filename} -tis -v > tmp1
  /local/kurtz/tallymer-test/bin/gt suffixerator -algbds 3 43 120 -db ${filename} -tis -v > tmp2
  diff tmp1 tmp2
done