File: gt_seqtransform_include.rb

package info (click to toggle)
genometools 1.6.2%2Bds-3
  • links: PTS, VCS
  • area: main
  • in suites: bookworm
  • size: 50,504 kB
  • sloc: ansic: 271,868; ruby: 30,327; python: 4,942; sh: 3,230; makefile: 1,214; perl: 219; pascal: 159; haskell: 37; sed: 5
file content (24 lines) | stat: -rw-r--r-- 848 bytes parent folder | download | duplicates (8)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
require "fileutils"
Name "gt seqtransform"
Keywords "gt_seqtransform (invariant)"
Test do
  FileUtils.copy "#{$testdata}nGASP/protein_100.fas", "."
  run_test "#{$bin}gt seqtransform protein_100.fas"
  run "diff #{last_stdout} #{$testdata}nGASP/protein_100.fas"
end

Name "gt seqtransform"
Keywords "gt_seqtransform -addstopaminos"
Test do
  FileUtils.copy "#{$testdata}nGASP/protein_100.fas", "."
  run_test "#{$bin}gt seqtransform -addstopaminos protein_100.fas"
  run "diff #{last_stdout} #{$testdata}nGASP/protein_100_with_stop.fas"
end

Name "gt seqtransform"
Keywords "gt_seqtransform -addstopaminos (invariant)"
Test do
  FileUtils.copy "#{$testdata}nGASP/protein_100_with_stop.fas", "."
  run_test "#{$bin}gt seqtransform -addstopaminos protein_100_with_stop.fas"
  run "diff #{last_stdout} #{$testdata}nGASP/protein_100_with_stop.fas"
end