File: gt_gff3_prob_1.gff3

package info (click to toggle)
genometools 1.6.6%2Bds-2
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 50,576 kB
  • sloc: ansic: 271,876; ruby: 29,930; python: 5,106; sh: 3,083; makefile: 1,213; perl: 219; pascal: 159; haskell: 37; sed: 5
file content (20 lines) | stat: -rw-r--r-- 996 bytes parent folder | download | duplicates (8) 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
 
##gff-version 3
##sequence-region   NC_003070 1 4294967295
NC_003070	gth	gene	5842386	5842719	.	+	.	ID=gene485
NC_003070	gth	mRNA	5842386	5842719	.	+	.	ID=mRNA517;Parent=gene485
NC_003070	gth	exon	5842386	5842719	0.934132	+	.	Parent=mRNA517
###
# the following mRNA refers to an undefined gene
NC_003070	gth	mRNA	5869883	5872798	.	+	.	ID=mRNA520;Parent=gene488
NC_003070	gth	exon	5869883	5870106	0.812500	+	.	Parent=mRNA520
NC_003070	gth	exon	5872420	5872515	0.781250	+	.	Parent=mRNA520
NC_003070	gth	exon	5872601	5872798	0.742424	+	.	Parent=mRNA520
NC_003070	gth	mRNA	5869902	5870107	.	+	.	ID=mRNA521;Parent=gene488
NC_003070	gth	exon	5869902	5870107	0.766990	+	.	Parent=mRNA521
###
NC_003070	gth	gene	5870624	5871356	.	-	.	ID=gene489
NC_003070	gth	mRNA	5870624	5871356	.	-	.	ID=mRNA522;Parent=gene489
NC_003070	gth	exon	5870624	5870822	1.000000	-	.	Parent=mRNA522
NC_003070	gth	exon	5870939	5871023	0.976471	-	.	Parent=mRNA522
NC_003070	gth	exon	5871121	5871356	0.775424	-	.	Parent=mRNA522
###